Information on SUBCLASS 2.5.2 |
Subclass Accession number: 153
Subclass: 2.5.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 16.9 +/- 17.2 Average RMSD (Å) : 0.660 +/- 0.232 Consensus geometry
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Consensus Sequence: | XphDhh |
(φψ)-conformation: | aababb |
Pattern: | [ilt] | x | [ael] | [afgilmv] | x | [cekr] | [dekqry] | [acfly] | [DRS] | [afilv] | [ilvw] | x |
Conservation: | 0.685 | -0.796 | -0.089 | -0.798 | -0.743 | 0.100 | -0.358 | 0.036 | 2.605 | -0.055 | 0.600 | -1.187 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bg6_*_69 | 1bg6 | - | 69 | 80 | IGLAVKDADVIL | HHHHHTT-SEEE | aaaaaaaxabbb |
1cb6_A_1145 | 1cb6 | A | 1146 | 1157 | EAAVARFFSASC | HHHHHHHSSEEE | aaaaaaaxabbb |
1cnz_A_59 | 1cnz | A | 61 | 72 | TVEGCEQADAIL | HHHHHHTSSEEE | aaaaaaababbx |
1d2k_A_224 | 1d2k | A | 224 | 235 | LAEMDKYLDFWN | HHHHHTT-SEEE | aaaaaaaxabbb |
1ff9_A_59 | 1ff9 | A | 62 | 73 | LDAEVAKHDLVI | HHHHHTTSSEEE | aaaaaaababbb |
1io7_A_320 | 1io7 | A | 331 | 342 | IEEFSKRFRHIE | HHHHHTT-SEEE | aaaaaaababbb |
1js1_X_93 | 1js1 | X | 97 | 108 | IPVMGCYCDIIG | HHHHHHT-SEEE | aaaaaaababbb |
1jw9_B_112 | 1jw9 | B | 115 | 126 | LAALIAEHDLVL | HHHHHHTSSEEE | aaaaaaababbb |
1uqt_A_169 | 1uqt | A | 172 | 183 | LLEQLCDYDLLG | HHHHHTTSSEEE | aaaaaaaxabbb |
2dnj_A_19 | 2dnj | A | 25 | 36 | IVRIVRRYDIVL | HHHHHHT-SEEE | aaaaaaababbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1io7_A_320 | 1io7 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 320 |
1io7_A_320 | 1io7 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 322 |
1io7_A_320 | 1io7 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 323 |
1io7_A_320 | 1io7 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 324 |
1io7_A_320 | 1io7 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | E - 326 |
1js1_X_93 | 1js1 | X | PO4PHOSPHATE ION | R - 110 |
2dnj_A_19 | 2dnj | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 19 |
2dnj_A_19 | 2dnj | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 20 |
2dnj_A_19 | 2dnj | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 21 |
Clusters included in this Subclass |
CLUSTER: HE.2.84 |
CLUSTER: HE.3.42 |
CLUSTER: HE.4.114 |