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Information on SUBCLASS 2.5.5
Subclass Accession number: 156
Subclass: 2.5.5 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 13.8 +/- 13.8
Average RMSD (Å) : 0.560 +/- 0.114

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XphDXh
(φψ)-conformation: aababb
Pattern: [hiy][EKNQR][STV][ALV]x[gnpq][mry][CIMVY][AD]x[ILV][filv][HILY]
Conservation:-0.5550.5010.2630.583-1.451-0.620-0.540-0.1141.899-1.1261.766-0.475-0.131
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1duv_G_891duv   G93105ARVLGRMYDGIQYHHHHTTT-SEEEEaaaaaaababbbb
1edq_A_3751edq   A375387YNVAQNSMDHIFLHHHHGGG-SEEEEaaaaaaababbxx
1iir_A_2951iir   A295307HQVLFGRVAAVIHHHHHGGGSSEEEEaaaaaaababbbb
1ml4_A_901ml4   A94106IKTVEQYCDVIVIHHHHTTT-SEEEEaaaaaaababbbb
1v6s_A_1991v6s   A202214IESLLPRIDRLLIHHHHGGG-SEEEEaaaaaaababbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1duv_G_891duv   G     PSQNDELTA-(N'-SULPHODIAMINOPHOSPHINYL)-L-ORNITHINE R - 106
1ml4_A_901ml4   A     PALN-(PHOSPHONACETYL)-L-ASPARTIC ACID R - 107

Clusters included in this Subclass
CLUSTER: HE.6.28