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Information on SUBCLASS 6.1.2
Subclass Accession number: 1929
Subclass: 6.1.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 48726 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 4.2 +/- 6.2
Average RMSD (Å) : 1.025 +/- 0.287

Consensus geometry
d (Å): 21 delta (°): 0-45 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: XXXXXXXhXp
(φψ)-conformation: bbppppppbb
Pattern: xxx[EKPS]xxx[AKNQ][ALPY]xx[ILTY]
Conservation:-1.0000.775-1.2151.438-0.552-0.7410.7350.941-1.3810.443-1.0500.609
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ccz_A_861ccz   A91102YVLEMVSKPMIYEEE------EEEbbbxxxxxxbbb
1n0u_A_5541n0u   A555566KISPPVVAYRETEEE------EEEbbbxpxxxbbbb
1oll_A_811oll   A8191.LWSEPSNLLDL.EE------EEE.xxxxpxpxbxx
1qqr_A_2421qqr   A243254YRVKNREQAYRIEE----B--EEEbbxpxbxxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ccz_A_861ccz   A     NAGN-ACETYL-D-GLUCOSAMINE E - 104
1n0u_A_5541n0u   A     SO1[1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA., 7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID P - 559
1n0u_A_5541n0u   A     SO1[1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA., 7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID V - 560
1n0u_A_5541n0u   A     SO1[1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA., 7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID V - 561
1n0u_A_5541n0u   A     SO1[1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA., 7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID A - 562
1n0u_A_5541n0u   A     SO1[1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA., 7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID Y - 563
1n0u_A_5541n0u   A     SO1[1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA., 7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID R - 564
1oll_A_811oll   A     EDO1,2-ETHANEDIOL L - 88

Clusters included in this Subclass
CLUSTER: AR.6.96
CLUSTER: AR.7.51