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Information on SUBCLASS 3.2.9
Subclass Accession number: 201
Subclass: 3.2.9 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 5.0 +/- 7.3
Average RMSD (Å) : 0.767 +/- 0.115

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXchXXX
(φψ)-conformation: aalppbb
Pattern: x[EGS][AKV][AL]x[EQS][ANV]x[ENY]x[ALV][KQR][AL]x[DG][GIL][KPQ]x[ITY][ALV]
Conservation:-0.1990.089-0.4880.785-0.9211.099-0.921-1.065-0.055-0.9210.2331.8200.785-1.3542.253-1.2090.666-0.488-0.3440.233
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ewk_A_1651ewk   A165184SSVAIQVQNLLQLFDIPQIAHHHHHHHHHHHGGGT--EEEaaaaaaaaaaaaaalbxbbx
1jnr_A_321jnr   A3554CGAAYEAAYWAKLGGLKVTLHHHHHHHHHHHTTTT--EEEaaaaaaaaaaaaaalxxbbb
1moq_*_5231moq   -526545LEKLKSNIEEVRARGGQLYVHHHHHHHHHHTGGGT--EEEaaaaaaaaaaaaaavxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ewk_A_1651ewk   A     GLUGLUTAMIC ACID S - 165
1ewk_A_1651ewk   A     GLUGLUTAMIC ACID S - 166
1jnr_A_321jnr   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 32
1jnr_A_321jnr   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 33
1jnr_A_321jnr   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 34
1jnr_A_321jnr   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 55
1moq_*_5231moq   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID A - 547
1moq_*_5231moq   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID D - 548

Clusters included in this Subclass
CLUSTER: HE.7.69