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Information on SUBCLASS 2.7.1
Subclass Accession number: 2251
Subclass: 2.7.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 16.8 +/- 15.1
Average RMSD (Å) : 0.557 +/- 0.140

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XpXPXp
(φψ)-conformation: aapwaa
Pattern: xx[dstv][AILVY]x[deks][ALMT][P][aegpq][aderst][efl]xx[AKR][gikv]
Conservation:-0.526-0.439-0.1420.032-0.515-0.0860.1653.467-0.197-0.452-0.358-0.234-0.5350.392-0.571
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1axn_*_791axn   -8498LMVALVTPPAVFDAKHHHHHHS-HHHHHHHaaaaaaxwaaaaaaa
1k3r_A_541k3r   A6074ILTYMDTPQYLRRKVHHHHHHS-HHHHHHHaaaaaaxwaaaaaaa
1kea_A_671kea   A6781FEDILKTPKSEIAKDHHHHHHS-HHHHHHHaaaaaaxwaaaaaaa
1kq3_A_1521kq3   A152166TEIVAKAPARFLVAGHHHHHHS-HHHHHHHaaaaaaxwaaaaaaa
1ky8_A_671ky8   A6882RWSARDMPGTERLAVHHHHHHS-HHHHHHHaaaaaaxwaaaaaaa
1m6y_A_1381m6y   A139153QKVLNELPEEELARIHHHHHHS-HHHHHHHaaaaaaxwaaaaaaa
1or7_A_1241or7   A132146FRTIESLPEDLRMAIHHHHHHS-HHHHHHHaaaaaaxwaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1axn_*_791axn   *     CACALCIUM ION S - 103
1axn_*_791axn   *     CACALCIUM ION M - 104
1kea_A_671kea   A     ZNZINC ION F - 67
1kea_A_671kea   A     ZNZINC ION E - 68
1kea_A_671kea   A     ACTACETATE ION E - 68
1kea_A_671kea   A     ZNZINC ION D - 69
1kq3_A_1521kq3   A     ZNZINC ION D - 169
1kq3_A_1521kq3   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL D - 169
1kq3_A_1521kq3   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL T - 173
1m6y_A_1381m6y   A     MSESELENOMETHIONINE A - 138
1m6y_A_1381m6y   A     MSESELENOMETHIONINE L - 142

Clusters included in this Subclass
CLUSTER: HH.1.105
CLUSTER: HH.1.87
CLUSTER: HH.2.168
CLUSTER: HH.3.167