Information on SUBCLASS 2.7.1 |
Subclass Accession number: 2251
Subclass: 2.7.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 16.8 +/- 15.1 Average RMSD (Å) : 0.557 +/- 0.140 Consensus geometry
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Consensus Sequence: | XpXPXp |
(φψ)-conformation: | aapwaa |
Pattern: | x | x | [dstv] | [AILVY] | x | [deks] | [ALMT] | [P] | [aegpq] | [aderst] | [efl] | x | x | [AKR] | [gikv] |
Conservation: | -0.526 | -0.439 | -0.142 | 0.032 | -0.515 | -0.086 | 0.165 | 3.467 | -0.197 | -0.452 | -0.358 | -0.234 | -0.535 | 0.392 | -0.571 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1axn_*_79 | 1axn | - | 84 | 98 | LMVALVTPPAVFDAK | HHHHHHS-HHHHHHH | aaaaaaxwaaaaaaa |
1k3r_A_54 | 1k3r | A | 60 | 74 | ILTYMDTPQYLRRKV | HHHHHHS-HHHHHHH | aaaaaaxwaaaaaaa |
1kea_A_67 | 1kea | A | 67 | 81 | FEDILKTPKSEIAKD | HHHHHHS-HHHHHHH | aaaaaaxwaaaaaaa |
1kq3_A_152 | 1kq3 | A | 152 | 166 | TEIVAKAPARFLVAG | HHHHHHS-HHHHHHH | aaaaaaxwaaaaaaa |
1ky8_A_67 | 1ky8 | A | 68 | 82 | RWSARDMPGTERLAV | HHHHHHS-HHHHHHH | aaaaaaxwaaaaaaa |
1m6y_A_138 | 1m6y | A | 139 | 153 | QKVLNELPEEELARI | HHHHHHS-HHHHHHH | aaaaaaxwaaaaaaa |
1or7_A_124 | 1or7 | A | 132 | 146 | FRTIESLPEDLRMAI | HHHHHHS-HHHHHHH | aaaaaaxwaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1axn_*_79 | 1axn | * | CACALCIUM ION | S - 103 |
1axn_*_79 | 1axn | * | CACALCIUM ION | M - 104 |
1kea_A_67 | 1kea | A | ZNZINC ION | F - 67 |
1kea_A_67 | 1kea | A | ZNZINC ION | E - 68 |
1kea_A_67 | 1kea | A | ACTACETATE ION | E - 68 |
1kea_A_67 | 1kea | A | ZNZINC ION | D - 69 |
1kq3_A_152 | 1kq3 | A | ZNZINC ION | D - 169 |
1kq3_A_152 | 1kq3 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | D - 169 |
1kq3_A_152 | 1kq3 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | T - 173 |
1m6y_A_138 | 1m6y | A | MSESELENOMETHIONINE | A - 138 |
1m6y_A_138 | 1m6y | A | MSESELENOMETHIONINE | L - 142 |
Clusters included in this Subclass |
CLUSTER: HH.1.105 |
CLUSTER: HH.1.87 |
CLUSTER: HH.2.168 |
CLUSTER: HH.3.167 |