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Information on SUBCLASS 3.1.9
Subclass Accession number: 2274
Subclass: 3.1.9 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005344 (>75 %)  GO:0005344 (>75 %)  
SCOP : 46457 (>75 %)  46457 (>75 %)  46458 (>75 %)  46458 (>75 %)  46463 (>75 %)  
Number of loops: 2

Average sequence ID (%) : 7.4 +/- 0.0
Average RMSD (Å) : 0.600 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hXchXXX
(φψ)-conformation: aalbpaa
Pattern: [AV][PS][RS][H][DK][AG][MR][GN][IV][GT][PS][AK][EH][F]x[NQ][AL][KL][AK][CL][LV][AG][GK][AV][CF][QS][AE]
Conservation:-0.429-0.251-0.6073.848-0.251-0.073-0.4290.2840.640-0.607-0.251-0.6070.4622.423-0.0730.106-0.786-0.964-0.6070.106-0.073-0.073-0.607-0.4290.106-0.251-0.607
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ith_A_911ith   A91117VPSHDAMGITPKHFGQLLKLVGGVFQEHHHHHTTT--HHHHHHHHHHHHHHHHHaaaaaaavbxaaaaaaaaaaaaaaaaa
1kr7_A_621kr7   A6692ASRHKGRNVGSAEFHNAKACLAKACSAHHHHHTTT--HHHHHHHHHHHHHHHHHaaaaaaalbbaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ith_A_911ith   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 93
1ith_A_911ith   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 94
1ith_A_911ith   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 97
1ith_A_911ith   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 99
1ith_A_911ith   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 103
1ith_A_911ith   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 104
1ith_A_911ith   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 107
1ith_A_911ith   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 108
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 65
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 68
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 69
1kr7_A_621kr7   A     OXYOXYGEN MOLECULE H - 69
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 72
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 74
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 78
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 79
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 82
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 83
1kr7_A_621kr7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 86

Clusters included in this Subclass
CLUSTER: HH.4.230