Logo
Information on SUBCLASS 3.6.2
Subclass Accession number: 2328
Subclass: 3.6.2 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.5 (>75 %)  3.5.1 (>75 %)  3.5.1.13.5.1.38
GO : GO:0004067 (>75 %)  GO:0016810 (>75 %)  GO:0016811 (>75 %)  GO:0050417 (>75 %)  
SCOP : 53773 (>75 %)  53774 (>75 %)  53775 (>75 %)  
 Number of loops: 8

Average sequence ID (%) : 14.0 +/- 14.6
Average RMSD (Å) : 0.775 +/- 0.212

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pXXpphp
(φψ)-conformation: aapabaa
Pattern: x[aciv][CDKWY]x[ast][dkpqrs][DEN][pvy][dhknqr]x[ACFKM]x
Conservation:-0.5330.058-0.393-0.7770.726-0.1322.8110.1020.052-0.786-0.218-0.911
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eej_A_1311eej   A138149AIWCAKDKNKAFHHHTSSSHHHHHaaaaxabaaaaa
1ii2_A_4751ii2   A475486PRKAWKDVRQFNHHHH-S-HHHHHaaaaxabaaaaa
1n5u_A_3431n5u   A359370KCCAAADPHECYHHTTSSSHHHHHaaaaxabaaaaa
1n81_A_1161n81   A139150NVDHAREVKEKKHHHH-SSHHHHHaaaaxaxaaaaa
1on3_A_4511on3   A453464EIKAADDPDAMRHHHHSS-HHHHHaaaaxabaaaaa
1rj1_A_31rj1   A718TCKNTPNYQLCLHHHTSS-HHHHHaaaababaaaaa
1sh0_A_2521sh0   A262273MVKFSSEPHLAQHHHTSSSHHHHHaaaaxabaaaaa
1v9m_A_1211v9m   A126137QAYEAQDPAGMAHHHHSSSHHHHHaaaapabaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1n5u_A_3431n5u   A     MYRMYRISTIC ACID V - 344
1n5u_A_3431n5u   A     MYRMYRISTIC ACID L - 345
1n5u_A_3431n5u   A     MYRMYRISTIC ACID L - 347
1n5u_A_3431n5u   A     MYRMYRISTIC ACID R - 348
1n5u_A_3431n5u   A     MYRMYRISTIC ACID A - 350
1n5u_A_3431n5u   A     MYRMYRISTIC ACID K - 351
1n5u_A_3431n5u   A     MYRMYRISTIC ACID E - 354
1on3_A_4511on3   A     MCAMETHYLMALONYL-COENZYME A K - 452

Clusters included in this Subclass
CLUSTER: HH.3.210
CLUSTER: HH.4.51
CLUSTER: HH.5.173