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Information on SUBCLASS 3.11.1
Subclass Accession number: 2345
Subclass: 3.11.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2 (>75 %)  
 Number of loops: 6

Average sequence ID (%) : 14.2 +/- 13.7
Average RMSD (Å) : 0.817 +/- 0.306

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XpXXGhX
(φψ)-conformation: aappgaa
Pattern: [AKQRS][kltv][fily]x[AEQRS][aeks][EKPT][GN][AFGVY][akr][de][knty][AEFL][AGIL][egnq]x
Conservation:0.316-0.513-0.013-0.8880.176-0.3680.5743.156-0.579-0.0771.107-0.419-0.790-0.396-0.503-0.784
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c52_*_321c52   -3449AEILAKEGGREYLILVHHHHTSTTHHHHHHHHaaaaaxxvaaaaaaaa
1ig8_A_4191ig8   A419434SVYNRYPGFKEKAANAHHHHHSTTHHHHHHHHaaaaaxpvaaaaaaaa
1jlv_A_1771jlv   A185200RTRKEAPGAAINEAGIHHHHHSTTHHHHHHHHaaaaapxvaaaaaaaa
1qz4_A_801qz4   A97112RKLSSAKGALDTLGNRHHHHHSTTHHHHHHHHaaaaaxpgaaaaaaaa
1vj5_A_3801vj5   A382397QLYFQEPGVAEAELEQHHHHHSTTHHHHHHHHaaaaaxpgaaaaaaaa
3pmg_A_253pmg   A2641KVFQSSTNYAENFIQSHHHHHSTTHHHHHHHHaaaaaxpvaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c52_*_321c52   *     HEMPROTOPORPHYRIN IX CONTAINING FE H - 32
1c52_*_321c52   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 33
1c52_*_321c52   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 36
1c52_*_321c52   *     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 45
1c52_*_321c52   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 46
1c52_*_321c52   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 49
1c52_*_321c52   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 50
1ig8_A_4191ig8   A     SULSULFATE ANION S - 419
1ig8_A_4191ig8   A     SULSULFATE ANION V - 420
1qz4_A_801qz4   A     HGMERCURY (II) ION T - 89
1qz4_A_801qz4   A     HGMERCURY (II) ION M - 93
1qz4_A_801qz4   A     PO4PHOSPHATE ION R - 97
1qz4_A_801qz4   A     HGMERCURY (II) ION R - 97
1qz4_A_801qz4   A     HGMERCURY (II) ION L - 99
1qz4_A_801qz4   A     HGMERCURY (II) ION L - 109
1qz4_A_801qz4   A     HGMERCURY (II) ION I - 113
1vj5_A_3801vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA Y - 381
1vj5_A_3801vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA Q - 382
1vj5_A_3801vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA F - 385

Clusters included in this Subclass
CLUSTER: HH.3.90
CLUSTER: HH.4.196