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Information on SUBCLASS 3.13.1
Subclass Accession number: 2349
Subclass: 3.13.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004553 (>50 %)  GO:0005489 (>75 %)  GO:0016798 (>50 %)  
SCOP : 48207 (>50 %)  48208 (>50 %)  48213 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 9.8 +/- 15.0
Average RMSD (Å) : 0.833 +/- 0.252

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 0-45 rho (°): 135-180
Consensus Sequence: XpphXhp
(φψ)-conformation: aapbbaa
Pattern: [IWY][QRS]x[NT][ET][IPV][AST][ILV][DNR][DWY][DN][AG][GLP]x[AKV][GVW]x
Conservation:0.405-0.036-0.6971.2840.648-0.3660.2951.0660.074-0.0362.0950.820-1.689-1.358-0.807-1.027-0.672
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ia6_A_4061ia6   A406422YQYTEVALDYNAGLVGVHHHHB--HHHHHHHHHHaaaaxbbaaaaaaaaaa
1p9r_A_4691p9r   A471487IRATTPSIRDDGLDKVRHHTT---HHHHHHHHHHaaaabxxaaaaaaaaaa
1ut9_A_7911ut9   A791807WSTNEITVNWNAPFAWVHHHHB--HHHHHHHHHHaaaaxbbaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1p9r_A_4691p9r   A     MSESELENOMETHIONINE K - 469
1p9r_A_4691p9r   A     MSESELENOMETHIONINE H - 470
1p9r_A_4691p9r   A     MSESELENOMETHIONINE I - 471
1p9r_A_4691p9r   A     MSESELENOMETHIONINE R - 472
1p9r_A_4691p9r   A     MSESELENOMETHIONINE R - 479
1p9r_A_4691p9r   A     MSESELENOMETHIONINE D - 481
1p9r_A_4691p9r   A     MSESELENOMETHIONINE L - 483
1p9r_A_4691p9r   A     MSESELENOMETHIONINE K - 485

Clusters included in this Subclass
CLUSTER: HH.4.251