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Information on SUBCLASS 4.13.1
Subclass Accession number: 2398
Subclass: 4.13.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 14 (>75 %)  2.1 (>75 %)  2.1.3 (>75 %)  2.1.3.33.2 (>75 %)  3.2.1 (>75 %)  
GO : GO:0004553 (>50 %)  GO:0004585 (>75 %)  GO:0015926 (>75 %)  GO:0016597 (>75 %)  GO:0016741 (>75 %)  GO:0016743 (>75 %)  GO:0016798 (>50 %)  GO:0043176 (>75 %)  
SCOP : 51350 (>75 %)  51445 (>75 %)  51521 (>75 %)  53670 (>75 %)  53671 (>75 %)  53672 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 18.5 +/- 17.6
Average RMSD (Å) : 0.325 +/- 0.050

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXXphpXX
(φψ)-conformation: aapappaa
Pattern: xxx[GNS]x[AIV]xx[CS]x[AL][EHPS]xx[DER][K]xx
Conservation:-0.886-0.886-0.6240.613-0.7050.604-0.332-0.3010.936-0.6240.591-0.311-0.247-0.0250.7243.141-0.677-0.991
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4m_A_3191a4m   A325342LNINAAKSSFLPEEEKKEHHHHHHHTSS--HHHHHHaaaaaaaaxaxxaaaaaa
1eg3_A_1961eg3   A199216FKTGIISLCKAHLEDKYRHHHHHHHTSSS-HHHHHHaaaaaaaaxaxxaaaaaa
1io7_A_1841io7   A184201EVVSRVVNSNLSDIEKLGHHHHHHHTSS--HHHHHHaaaaaaaabaxxaaaaaa
1oks_A_41oks   A623VIRSIIKSSRLEEDRKRYHHHHHHHHS-S-HHHHHHaaaaaaaaxaxpaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 205
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 206
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 207
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 208
1oks_A_41oks   A     MSESELENOMETHIONINE R - 4
1oks_A_41oks   A     MSESELENOMETHIONINE I - 7
1oks_A_41oks   A     MSESELENOMETHIONINE R - 8
1oks_A_41oks   A     MSESELENOMETHIONINE I - 11
1oks_A_41oks   A     MSESELENOMETHIONINE K - 12
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID L - 16
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID E - 17
1oks_A_41oks   A     MSESELENOMETHIONINE R - 20
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID R - 20
1oks_A_41oks   A     MSESELENOMETHIONINE K - 21
1oks_A_41oks   A     MSESELENOMETHIONINE R - 22
1oks_A_41oks   A     MSESELENOMETHIONINE Y - 23
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID Y - 23
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oks_A_41oks   A NHENHE BINDING SITE FOR CHAIN AR - 20
1oks_A_41oks   A NHENHE BINDING SITE FOR CHAIN AY - 23

Clusters included in this Subclass
CLUSTER: HH.4.150