ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.16.1

Subclass Accession number: 2402
Subclass: 4.16.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>50 %) 1 (>75 %) 2 (>50 %)

Number of loops: 3

Average sequence ID (%) : 16.1 +/- 14.6
Average RMSD (Å) : 0.500 +/- 0.100

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 45-90

Consensus Sequence:	hXXXXpXp
(φψ)-conformation:	aaplppaa

Pattern:	[DER]	[ADN]	[DRT]	[AFM]	x	[EGS]	[ET]	[VW]	[A]	[GNR]	[AL]	[LTV]	[AK]	[GS]	[KV]	[ERS]	x	[DST]	x	x	[AN]	x	[AIL]	[AFL]	[DER]	[KY]	[ALW]	[FKV]	[NS]
Conservation:	0.213	-0.571	-0.832	-0.701	-0.832	-0.440	0.836	0.088	2.825	-0.179	0.156	-0.179	0.632	1.687	-0.235	-0.310	-1.355	0.082	0.173	0.094	-0.104	-1.093	-0.310	-0.832	0.213	1.225	-0.963	-1.485	2.198

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1gwe_A_440	1gwe	A	443	471	RDDFVETVAGALKGVRQDVQARAFEYWKN	HHHHHHHHHHHHTT--HHHHHHHHHHHHH	aaaaaaaaaaaaxvxpaaaaaaaaaaaaa
1nth_A_380	1nth	A	382	410	EARMMGEVARATAGVEISEVNVILDKLVS	HHHHHHHHHHHHTT--HHHHHHHHHHHHH	aaaaaaaaaaaapvxpaaaaaaaaaaaaa
1qsa_A_397	1qsa	A	397	425	DNTARSEWANLVKSKSKTEQAQLARYAFN	HHHHHHHHHHHHTT--HHHHHHHHHHHHH	aaaaaaaaaaaaxvxxaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1qsa_A_397	1qsa	A	ACTACETATE ION	T - 399

Clusters included in this Subclass