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Information on SUBCLASS 4.27.1
Subclass Accession number: 2417
Subclass: 4.27.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 5.3 (>75 %)  5.3.1 (>75 %)  5.3.1.1
GO : GO:0004807 (>75 %)  GO:0016853 (>75 %)  GO:0016860 (>75 %)  GO:0016861 (>75 %)  
SCOP : 51351 (>75 %)  51352 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 11.1 +/- 12.7
Average RMSD (Å) : 1.267 +/- 0.153

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hhhXXpXX
(φψ)-conformation: aappbpaa
Pattern: [IL]xxxx[AFY][FPV][FL][EPR]x[DES][ALT]xxx[DQT][AR][DQW][FL]x[CE]
Conservation:2.305-1.169-0.0550.155-0.8910.503-1.1691.452-0.055-1.1691.060-0.333-1.1690.155-1.1690.0850.782-0.1941.469-0.7510.159
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ngk_A_711ngk   A7191LRMRHAPFRISLIERDAWLRCHHHHHTTS---HHHHHHHHHHaaaaaaabxbxaaaaaaaaaa
1ojr_A_1451ojr   A147167LIALTYVLENDTAVFTRQLWEHHHHTTTS-S-HHHHHHHHHHaaaaaaaxpxbaaaaaaaaaa
1q8c_A_141q8c   A2545IFSLLFFLPKEAEVIQADFLEHHHHGGG----HHHHHHHHHHaaaaaaaxwbxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ngk_A_711ngk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 71
1ngk_A_711ngk   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 74
1ngk_A_711ngk   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 75
1ngk_A_711ngk   A     CNCYANIDE GROUP H - 75
1ngk_A_711ngk   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 78
1ngk_A_711ngk   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 80
1ngk_A_711ngk   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 84
1ngk_A_711ngk   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 85
1ngk_A_711ngk   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 88
1ngk_A_711ngk   A     CNCYANIDE GROUP W - 88
1ngk_A_711ngk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 89
1ojr_A_1451ojr   A     GOLGLYCEROL V - 153
1ojr_A_1451ojr   A     GOLGLYCEROL L - 154
1ojr_A_1451ojr   A     GOLGLYCEROL Q - 164
1q8c_A_141q8c   A     IODIODIDE ION R - 14
1q8c_A_141q8c   A     IODIODIDE ION R - 17
1q8c_A_141q8c   A     IODIODIDE ION L - 32
1q8c_A_141q8c   A     IODIODIDE ION P - 33
1q8c_A_141q8c   A     IODIODIDE ION K - 34
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ojr_A_1451ojr   A GO4GOL BINDING SITE FOR CHAIN AL - 154

Clusters included in this Subclass
CLUSTER: HH.6.78