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Information on SUBCLASS 5.3.4
Subclass Accession number: 2443
Subclass: 5.3.4 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 16.7 +/- 16.3
Average RMSD (Å) : 0.933 +/- 0.252

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XXXXXhpXp
(φψ)-conformation: aalppppaa
Pattern: [AL][KLV][AKS][HKR][AL]x[KL][EGR][EG]x[IL][ES]x[ESY]x[AK]
Conservation:0.290-0.983-0.0860.9620.290-0.8340.244-0.8340.654-1.7322.1161.430-0.430-0.834-0.6840.430
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aui_A_431aui   A4661LKAHLMKEGRLEESVAHHHHHHTT--B-HHHHaaaaaaavxbbxaaaa
1idr_A_31idr   A318LLSRLRKREPISIYDKHHHHHHTT----HHHHaaaaaaalxxxxaaaa
1v8g_A_31v8g   A318AVKKAILGEVLEEEEAHHHHHHTT----HHHHaaaaaaavxxxxaaaa

Clusters included in this Subclass
CLUSTER: HH.5.249