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Information on SUBCLASS 5.18.1
Subclass Accession number: 2465
Subclass: 5.18.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.1 (>50 %)  3.1.1 (>50 %)  3.1.1.4
GO : GO:0003700 (>75 %)  GO:0005509 (>50 %)  GO:0016298 (>50 %)  GO:0016788 (>50 %)  GO:0016789 (>50 %)  
SCOP : 46688 (>50 %)  46688 (>75 %)  46689 (>75 %)  46690 (>75 %)  48618 (>50 %)  48619 (>50 %)  48623 (>50 %)  
Number of loops: 5

Average sequence ID (%) : 25.5 +/- 19.6
Average RMSD (Å) : 0.500 +/- 0.071

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: Xpcpphppp
(φψ)-conformation: aababppaa
Pattern: [akst][EHNQS][aq]xx[efr][L][EK][EKR][aes][F]x[EFR][KNT][MQR][KSY][LP][DNT]x[DEKRY][DERT][kr][EQTY][eq][ILV][AS][EKQRS]x[CLT]
Conservation:-0.659-0.142-0.606-0.672-1.016-1.0391.8661.5030.755-0.6943.387-1.085-0.5740.4930.498-0.049-0.3220.315-1.040-0.751-0.483-0.162-0.473-0.0260.7821.023-0.081-0.568-0.178
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1akh_A_791akh   A79107PQARAFLEEVFRRKQSLNSKEKEEVAKKCHHHHHHHHHHHHH-SS--HHHHHHHHHHHaaaaaaaaaaaaababbxaaaaaaaaaaa
1e3o_C_1101e3o   C110138TNIRVALEKSFMENQKPTSEDITLIAEQLHHHHHHHHHHHHH-SS--HHHHHHHHHHHaaaaaaaaaaaaababxxaaaaaaaaaaa
1fjl_A_101fjl   A1038ASQLDELERAFERTQYPDIYTREELAQRTHHHHHHHHHHHHH-SS--HHHHHHHHHHHaaaaaaaaaaaaababpxaaaaaaaaaaa
1p7i_A_101p7i   A1038SEQLARLKREFNENRYLTERRRQQLSSELHHHHHHHHHHHHH-SS--HHHHHHHHHHHaaaaaaaaaaaaababxbaaaaaaaaaaa
1puf_A_2141puf   A214242KHQTLELEKEFLFNMYLTRDRRYEVARLLHHHHHHHHHHHHH-SS--HHHHHHHHHHHaaaaaaaaaaaaababxbaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1p7i_A_101p7i   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID Y - 25

Clusters included in this Subclass
CLUSTER: HH.4.86