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Information on SUBCLASS 5.31.1
Subclass Accession number: 2478
Subclass: 5.31.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008660 (>50 %)  GO:0016810 (>50 %)  GO:0019239 (>50 %)  
SCOP : 53685 (>50 %)  53686 (>50 %)  53687 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 14.6 +/- 15.5
Average RMSD (Å) : 1.033 +/- 0.306

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXGpXhphX
(φψ)-conformation: aaeaapbaa
Pattern: x[DKP][ILT][KL][QRT]xx[G][EKR][AD][AIV][ES][LW]x[ADS][AIL]
Conservation:-0.877-0.224-0.143-0.199-0.143-0.877-0.8773.2030.5100.3100.1020.4970.369-1.204-0.224-0.224
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cp2_A_561cp2   A5772LDTLREEGEDVELDSIHHHHHHHGGG--HHHHaaaaaaaeaapbaaaa
1mwv_A_1531mwv   A153168WPIKQKYGRAISWADLHHHHHHHGGGS-HHHHaaaaaaaeaabxaaaa
1ofu_A_1661ofu   A167182EKLLTILGKDASLLAAHHHHHHHGGG--HHHHaaaaaaaeaaxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ofu_A_1661ofu   A     GDPGUANOSINE-5'-DIPHOSPHATE N - 166
1ofu_A_1661ofu   A     GDPGUANOSINE-5'-DIPHOSPHATE F - 183
1ofu_A_1661ofu   A     GDPGUANOSINE-5'-DIPHOSPHATE A - 184
1ofu_A_1661ofu   A     GDPGUANOSINE-5'-DIPHOSPHATE A - 186
1ofu_A_1661ofu   A     GDPGUANOSINE-5'-DIPHOSPHATE D - 187
1ofu_A_1661ofu   A     GDPGUANOSINE-5'-DIPHOSPHATE L - 190

Clusters included in this Subclass
CLUSTER: HH.5.253