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Information on SUBCLASS 6.4.1
Subclass Accession number: 2488
Subclass: 6.4.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.18
GO : GO:0004108 (>75 %)  GO:0004364 (>75 %)  GO:0016746 (>75 %)  GO:0016765 (>75 %)  GO:0046912 (>75 %)  
SCOP : 47112 (>75 %)  47113 (>75 %)  47134 (>75 %)  47615 (>75 %)  47616 (>75 %)  47617 (>75 %)  48255 (>75 %)  48256 (>75 %)  48257 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 15.4 +/- 14.5
Average RMSD (Å) : 1.050 +/- 0.351

Consensus geometry
d (Å): 15 delta (°): 135-180 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXchpphphp
(φψ)-conformation: aagbabbpaa
Pattern: xxx[I]x[ERS][IL][AGIL][KR][EKNR]x[GN][AIV][EKQT][ER][ILVY][EHS][DGP]x[AIV]xxx[LTV]xx[AFV][LT][EFKQ]x[FMRY][GLV][EQT][ENS][ILV][AILV][DERS][DEK][AI]x
Conservation:-1.174-0.657-1.1742.385-1.2890.0811.662-1.1742.2190.261-1.4032.0440.647-0.0261.0080.1460.1330.122-1.0450.616-0.864-1.002-0.6570.125-1.002-0.600-0.3160.326-0.657-0.657-0.428-0.8480.4750.8121.3330.089-0.2550.9890.561-0.810
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b67_A_61b67   A645IAPIGRIIKNAGAERVSDDARIALAKVLEEMGEEIASEAVHHHHHHHHHHTT-S---HHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaagxabbxaaaaaaaaaaaaaaaaaaaaaaa
1h3o_A_8731h3o   A877916QRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISHHHHHHHHHTTT-----TTHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaUbabbpaaaaaaaaaaaaaaaaaaaaaaa
1s32_B_311s32   B3170KPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVHHHHHHHHHHTT-----TTHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaavxabbxaaaaaaaaaaaaaaaaaaaaaaa
1taf_A_201taf   A2261AQVIMSILKELNVQEYEPRVVNQLLEFTFRYVTSILDDAKHHHHHHHHHHTT-----THHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaavbabbxaaaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h3o_A_8731h3o   A     MSESELENOMETHIONINE Q - 873
1h3o_A_8731h3o   A     MSESELENOMETHIONINE P - 875
1h3o_A_8731h3o   A     MSESELENOMETHIONINE L - 876
1h3o_A_8731h3o   A     MSESELENOMETHIONINE R - 879
1h3o_A_8731h3o   A     MSESELENOMETHIONINE V - 897
1h3o_A_8731h3o   A     MSESELENOMETHIONINE S - 898
1h3o_A_8731h3o   A     MSESELENOMETHIONINE Y - 899
1h3o_A_8731h3o   A     MSESELENOMETHIONINE S - 901
1h3o_A_8731h3o   A     MSESELENOMETHIONINE H - 902
1h3o_A_8731h3o   A     MSESELENOMETHIONINE A - 903
1h3o_A_8731h3o   A     MSESELENOMETHIONINE T - 904
1h3o_A_8731h3o   A     MSESELENOMETHIONINE Q - 906
1h3o_A_8731h3o   A     MSESELENOMETHIONINE R - 907
1h3o_A_8731h3o   A     MSESELENOMETHIONINE L - 911
1h3o_A_8731h3o   A     MSESELENOMETHIONINE I - 915
1taf_A_201taf   A     ZNZINC ION L - 32
1taf_A_201taf   A     ZNZINC ION N - 33
1taf_A_201taf   A     ZNZINC ION E - 38

Clusters included in this Subclass
CLUSTER: HH.8.22
CLUSTER: HH.9.18