Information on SUBCLASS 6.10.1 |
Subclass Accession number: 2496
Subclass: 6.10.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>75 %) 3.4.25 (>75 %) 3.4.25.1 (>75 %) 5.4 (>75 %) 5.4.99 (>75 %) 5.4.99.17 GO : GO:0004175 (>75 %) GO:0005344 (>75 %) GO:0008233 (>75 %) GO:0009975 (>75 %) GO:0016829 (>75 %) GO:0016853 (>75 %) GO:0016866 (>75 %) GO:0051007 (>75 %) SCOP : 46457 (>75 %) 46458 (>75 %) 46463 (>75 %) 48207 (>75 %) 48239 (>75 %) 48243 (>75 %) 56234 (>75 %) 56235 (>75 %) 56251 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 15.3 +/- 14.4 Average RMSD (Å) : 0.725 +/- 0.330 Consensus geometry
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Consensus Sequence: | XphpXchXXX |
(φψ)-conformation: | aapbplppaa |
Pattern: | [KS] | x | x | [AIL] | [FMVY] | [AG] | x | [ACL] | x | [AKS] | x | [FLWY] | [EHKR] | [EPQ] | [DGN] | [LM] | [EGST] | [KP] | [EL] | [DE] | [ALTV] | [AFIV] | [ADEK] | x | [AIV] |
Conservation: | 0.914 | -1.722 | -0.993 | -0.333 | -0.070 | 0.915 | -1.150 | 0.623 | -0.545 | 0.075 | -1.023 | 0.566 | 0.121 | 0.533 | 0.730 | 1.728 | -0.833 | 0.959 | 0.135 | 2.377 | -0.642 | -0.578 | -0.578 | -1.595 | 0.387 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g0u_2_131 | 1g0u | 2 | 131 | 155 | STFIYGYCDKNFRENMSKEETVDFI | HHHHHHHHHHH--SS--HHHHHHHH | aaaaaaaaaaaxbxlxxaaaaaaaa |
1g0u_H_131 | 1g0u | H | 131 | 155 | SLAAMAVLESHWKQDLTKEEAIKLA | HHHHHHHHHHH--SS--HHHHHHHH | aaaaaaaaaaaxbxvxxaaaaaaaa |
1g0u_I_131 | 1g0u | I | 131 | 155 | SDQLFGMCESLYEPNLEPEDLFETI | HHHHHHHHHHH--SS--HHHHHHHH | aaaaaaaaaaaxbxlxxaaaaaaaa |
1j33_A_195 | 1j33 | A | 201 | 225 | KRQAVARALARLHPGMGPLEVAAEV | HHHHHHHHHTT--TT--HHHHHHHH | aaaaaaaaaaaxbxgpxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g0u_I_131 | 1g0u | I | MGMAGNESIUM ION | S - 131 |
1g0u_I_131 | 1g0u | I | MGMAGNESIUM ION | D - 132 |
1g0u_2_131 | 1g0u | 2 | MGMAGNESIUM ION | A - 162 |
1g0u_H_131 | 1g0u | H | MGMAGNESIUM ION | G - 162 |
1g0u_2_131 | 1g0u | 2 | MGMAGNESIUM ION | I - 163 |
1g0u_I_131 | 1g0u | I | MGMAGNESIUM ION | A - 163 |
1g0u_2_131 | 1g0u | 2 | MGMAGNESIUM ION | K - 164 |
1g0u_H_131 | 1g0u | H | MGMAGNESIUM ION | W - 164 |
1g0u_I_131 | 1g0u | I | MGMAGNESIUM ION | D - 164 |
1g0u_2_131 | 1g0u | 2 | MGMAGNESIUM ION | W - 165 |
1g0u_H_131 | 1g0u | H | MGMAGNESIUM ION | N - 165 |
Clusters included in this Subclass |
CLUSTER: HH.7.37 |