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Information on SUBCLASS 3.16.1
Subclass Accession number: 253
Subclass: 3.16.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005351 (>75 %)  GO:0005386 (>75 %)  GO:0015144 (>75 %)  GO:0015290 (>75 %)  GO:0015291 (>75 %)  GO:0051119 (>75 %)  
SCOP : 55593 (>75 %)  55594 (>75 %)  55595 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 22.2 +/- 16.5
Average RMSD (Å) : 0.567 +/- 0.231

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XpXGXIX
(φψ)-conformation: aaplpbb
Pattern: x[AVY][FLW][HNR][AK]x[HRT]x[G]x[I][LMT]
Conservation:-0.957-0.6060.0950.235-0.084-0.375-0.396-0.8172.550-0.6771.287-0.256
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1avq_A_221avq   A2233DAWHKLRLGVITHHHHHTTTT-EEaaaaaaapvxxb
1set_A_2271set   A228239VVLNALHSGEILHHHHHTTTT-EEaaaaaaapvxbx
3dfr_*_243dfr   -2839HYFRAQTVGKIMHHHHHTTTTSEEaaaaaaapvbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1avq_A_221avq   A     PO4PHOSPHATE ION W - 24
1avq_A_221avq   A     PO4PHOSPHATE ION R - 28
1avq_A_221avq   A     PO4PHOSPHATE ION T - 33
1set_A_2271set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE E - 227
3dfr_*_243dfr   *     MTXMETHOTREXATE P - 24
3dfr_*_243dfr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 26
3dfr_*_243dfr   *     MTXMETHOTREXATE D - 26
3dfr_*_243dfr   *     MTXMETHOTREXATE L - 27
3dfr_*_243dfr   *     MTXMETHOTREXATE H - 28
3dfr_*_243dfr   *     MTXMETHOTREXATE Y - 29
3dfr_*_243dfr   *     MTXMETHOTREXATE F - 30
3dfr_*_243dfr   *     MTXMETHOTREXATE R - 31
3dfr_*_243dfr   *     MTXMETHOTREXATE T - 34
3dfr_*_243dfr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 41
3dfr_*_243dfr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 42

Clusters included in this Subclass
CLUSTER: HE.4.168
CLUSTER: HE.5.170