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Information on SUBCLASS 0.1.30
Subclass Accession number: 2580
Subclass: 0.1.30 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 38.3 +/- 29.4
Average RMSD (Å) : 0.417 +/- 0.160

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XcpX
(φψ)-conformation: bbaa
Pattern: [kns]x[DGQ][HN][l][ATV][CSV][EF][aglm][AGP][GK]x
Conservation:-0.870-0.605-0.1152.521-0.090-0.0970.2890.440-1.4090.0010.750-0.816
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dl2_A_3341dl2   A334345KMDHLVCFMGGLEEEGGGGGHHHHxbxaaaaaaaaa
1fo3_A_5211fo3   A521532KMDHLVCFLPGTEEEGGGGHHHHHbbxaaaaaaaaa
1hcu_A_3041hcu   A304315NSGHLASFGGGNEEEGGGGGHHHHbbbaaaaaaaaa
1iin_A_1711iin   A178189FYDNSVVEMAKNEE-TTHHHHHHHbbxaaaaaaaaa
1kre_A_3261kre   A326337SSQHLTCFDGGSEEETGGGGHHHHbbbaaaaaaaaa
1nxc_A_4721nxc   A472483KMGHLTCFAGGMEEETGGGGHHHHbbxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dl2_A_3341dl2   A     GOLGLYCEROL H - 337
1dl2_A_3341dl2   A     GOLGLYCEROL L - 338
1dl2_A_3341dl2   A     CACALCIUM ION F - 341
1fo3_A_5211fo3   A     KIFKIFUNENSINE H - 524
1fo3_A_5211fo3   A     KIFKIFUNENSINE L - 525
1fo3_A_5211fo3   A     CACALCIUM ION F - 528
1hcu_A_3041hcu   A     CACALCIUM ION F - 311
1iin_A_1711iin   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE A - 172
1iin_A_1711iin   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE V - 173
1iin_A_1711iin   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE T - 174
1iin_A_1711iin   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE G - 175
1iin_A_1711iin   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE Y - 177
1kre_A_3261kre   A     DMJ1-DEOXYMANNOJIRIMYCIN H - 329
1kre_A_3261kre   A     DMJ1-DEOXYMANNOJIRIMYCIN L - 330
1kre_A_3261kre   A     CACALCIUM ION F - 333
1nxc_A_4721nxc   A     CACALCIUM ION F - 479

Clusters included in this Subclass
CLUSTER: EH.3.112
CLUSTER: EH.5.149
CLUSTER: EH.6.203