Logo
Information on SUBCLASS 1.1.19
Subclass Accession number: 2648
Subclass: 1.1.19 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 8.0 +/- 15.4
Average RMSD (Å) : 0.507 +/- 0.149

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 0-45 rho (°): 135-180
Consensus Sequence: XXpXX
(φψ)-conformation: bbpaa
Pattern: x[gikltv]x[adenqt]xxxxx
Conservation:-0.0450.5070.3192.002-1.427-0.810-0.8140.482-0.214
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b93_A_1361b93   A139147LIPDYQRYLEEE-HHHHHxbxxaaaaa
1dfm_A_461dfm   A4654LIFDPVGTNEEE-HHHHHxbpbaaaaa
1e12_A_1011e12   A102110VRSQWGRYLEEE-HHHHHbxbxaaaaa
1e43_A_2821e43   A282290SVFDVPLHFEEE-HHHHHxbxxaaaaa
1f2d_A_181f2d   A1826ISNLNRLSQEEE-HHHHHbxbxaaaaa
1g5a_A_3471g5a   A347355IGYNPLQMAEEE-HHHHHbbpbaaaaa
1hvx_A_2851hvx   A285293SLFDAPLHNEEE-HHHHHxbxxaaaaa
1hx0_A_2521hx0   A252260RVTEFKYGAEEE-HHHHHxbpbaaaaa
1j1u_A_601j1u   A6472ILLADLHAYEEE-HHHHHbxxxaaaaa
1jae_*_2411jae   -241249CVLEFQFGVEEE-HHHHHxbxxaaaaa
1jnr_A_3321jnr   A332340IYMHTEEALEEE-HHHHHxbxxaaaaa
1m7x_A_4791m7x   A479487YKWNLGWMHEEE-HHHHHbbxxaaaaa
1n3l_A_681n3l   A7179ILFADLHAYEEE-HHHHHbxxxaaaaa
1tdt_A_521tdt   A5361WVTHQWLKKEEE-HHHHHxbbxaaaaa
1xyn_*_1351xyn   -135143GTVTVQNHFEEE-HHHHHebbxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dfm_A_461dfm   A     MSESELENOMETHIONINE F - 48
1dfm_A_461dfm   A     MSESELENOMETHIONINE G - 52
1dfm_A_461dfm   A     MSESELENOMETHIONINE T - 53
1dfm_A_461dfm   A     CACALCIUM ION N - 54
1dfm_A_461dfm   A     MSESELENOMETHIONINE Y - 56
1dfm_A_461dfm   A     CACALCIUM ION Y - 56
1dfm_A_461dfm   A     MSESELENOMETHIONINE I - 57
1e12_A_1011e12   A     RETRETINAL Y - 109
1e12_A_1011e12   A     RETRETINAL W - 112
1e12_A_1011e12   A     RETRETINAL S - 115
1e12_A_1011e12   A     RETRETINAL T - 116
1e12_A_1011e12   A     RETRETINAL I - 119
1hx0_A_2521hx0   A     PCAPYROGLUTAMIC ACID R - 252
1hx0_A_2521hx0   A     CACALCIUM ION R - 252
1hx0_A_2521hx0   A     MALMALTOSE K - 261
1j1u_A_601j1u   A     TYRTYROSINE L - 65
1j1u_A_601j1u   A     TYRTYROSINE A - 67
1j1u_A_601j1u   A     TYRTYROSINE H - 70
1jae_*_2411jae   *     5HPPYROGLUTAMIC ACID C - 241
1jae_*_2411jae   *     CACALCIUM ION C - 241

Clusters included in this Subclass
CLUSTER: EH.0.18
CLUSTER: EH.1.123
CLUSTER: EH.1.69
CLUSTER: EH.2.42