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Information on SUBCLASS 1.2.9
Subclass Accession number: 2707
Subclass: 1.2.9 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 3.7 +/- 5.2
Average RMSD (Å) : 0.433 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXpX
(φψ)-conformation: bpaaa
Pattern: [DHT]x[ILT]x[AQT]x[ES]xx[DV][NQS]x[EPR]x[HLY]xxx
Conservation:0.2050.0380.539-0.9640.038-0.7972.3710.372-1.7991.0321.206-0.6300.205-0.2960.873-1.298-0.630-0.463
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gtr_A_2261gtr   A226243HSLCTLEFQDNRRLYDWVEEEEEGGGTTTHHHHHHHbxbbxaaaaaaaaaaaaa
1j09_A_2021j09   A202219DVIRAEEWLVSTPIHVLLEEEEEGGGGGGHHHHHHHbxbbxaaaaaaaaaaaaa
1l1l_A_6501l1l   A650667TITFQDSEGDQVESLLRQEEEE-GGGGGGHHHHHHHxxbbxaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gtr_A_2261gtr   A     ATPADENOSINE-5'-TRIPHOSPHATE L - 228
1gtr_A_2261gtr   A     ATPADENOSINE-5'-TRIPHOSPHATE C - 229
1gtr_A_2261gtr   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 230
1gtr_A_2261gtr   A     ATPADENOSINE-5'-TRIPHOSPHATE E - 232
1gtr_A_2261gtr   A     ATPADENOSINE-5'-TRIPHOSPHATE F - 233
1j09_A_2021j09   A     GLUGLUTAMIC ACID V - 203
1j09_A_2021j09   A     GLUGLUTAMIC ACID I - 204
1j09_A_2021j09   A     GLUGLUTAMIC ACID R - 205
1j09_A_2021j09   A     GLUGLUTAMIC ACID A - 206
1j09_A_2021j09   A     ATPADENOSINE-5'-TRIPHOSPHATE A - 206
1j09_A_2021j09   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED E - 208
1j09_A_2021j09   A     GLUGLUTAMIC ACID E - 208
1j09_A_2021j09   A     ATPADENOSINE-5'-TRIPHOSPHATE E - 208
1j09_A_2021j09   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED W - 209
1j09_A_2021j09   A     GLUGLUTAMIC ACID W - 209
1j09_A_2021j09   A     ATPADENOSINE-5'-TRIPHOSPHATE W - 209
1j09_A_2021j09   A     GLUGLUTAMIC ACID H - 216

Clusters included in this Subclass
CLUSTER: EH.6.318