Logo
Information on SUBCLASS 1.3.16
Subclass Accession number: 2729
Subclass: 1.3.16 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004802 (>75 %)  GO:0005489 (>75 %)  GO:0010181 (>75 %)  GO:0016744 (>75 %)  GO:0048037 (>75 %)  GO:0050662 (>75 %)  
SCOP : 52342 (>75 %)  52343 (>75 %)  52365 (>75 %)  52921 (>75 %)  52922 (>75 %)  52923 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 30.3 +/- 27.9
Average RMSD (Å) : 0.700 +/- 0.082

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXGpX
(φψ)-conformation: bbeaa
Pattern: [LV][I][FMV][IMV][AG][PT][G][ST][EG][ILV][AE][ILP][AF]x[AGK][AF][AIMY][DEQ][EKQ]x[ART]x
Conservation:0.3391.494-0.2610.4500.8720.2773.0490.496-0.2650.505-0.195-1.030-0.501-1.228-0.734-0.501-1.1300.4300.495-0.658-0.749-1.154
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ddg_A_4551ddg   A455476VIMIGPGTGIAPFRAFMQQRAAEEEE--GGGGHHHHHHHHHHHHbbbbbxeaaaaaaaaaaaaaaa
1itz_A_5651itz   A565586LIVMGTGSELEIAAKAADELRKEEEEE-GGGHHHHHHHHHHHHHbbbbbbeaaaaaaaaaaaaaaa
1ja1_A_5281ja1   A528549VIMVGPGTGIAPFMGFIQERAWEEEE--GGGGHHHHHHHHHHHHbbbbbxeaaaaaaaaaaaaaaa
1qgd_A_5521qgd   A552573LIFIATGSEVELAVAAYEKLTAEEEEE-GGGHHHHHHHHHHHHHbbxbbbeaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ddg_A_4551ddg   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 462
1ddg_A_4551ddg   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 463
1ddg_A_4551ddg   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 465
1ddg_A_4551ddg   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 466
1ja1_A_5281ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 533
1ja1_A_5281ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 534
1ja1_A_5281ja1   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 535
1ja1_A_5281ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 535
1ja1_A_5281ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 536
1ja1_A_5281ja1   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 538
1ja1_A_5281ja1   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 539

Clusters included in this Subclass
CLUSTER: EH.5.146