Information on SUBCLASS 4.4.4 |
Subclass Accession number: 284
Subclass: 4.4.4 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.3 (>75 %) 2.3.1 (>75 %) GO : GO:0008415 (>75 %) GO:0016746 (>75 %) GO:0016747 (>75 %) SCOP : 53900 (>75 %) 53901 (>75 %) 53902 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 17.6 +/- 22.7 Average RMSD (Å) : 0.567 +/- 0.231 Consensus geometry
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Consensus Sequence: | XXhXGhXX |
(φψ)-conformation: | aabplppb |
Pattern: | x | x | [STV] | [GRT] | [ALT] | [AIY] | [AKL] | [CR] | [AR] | [LY] | [PR] | [G] | [AFV] | [DKP] | [AIT] | [GL] | [AT] |
Conservation: | -0.634 | -0.718 | -0.213 | -0.634 | -0.381 | -0.550 | -0.718 | 0.229 | 0.213 | 0.434 | 0.721 | 3.406 | -0.465 | -0.129 | -0.381 | -0.750 | 0.570 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h7w_A_771 | 1h7w | A | 776 | 792 | RAVTTIARALPGFPILA | HHHHHHHHHSTT--EEE | aaaaaaaaabpvxpbbx |
1hbn_C_98 | 1hbn | C | 100 | 116 | VRSRAYLCRYRGADAGT | HHHHHHHHH-SS-EEEE | aaaaaaaaabxvbbbbb |
1nm2_A_280 | 1nm2 | A | 280 | 296 | TLTGLAKRALPGVKTLA | HHHHHHHHHSTT-EEEE | aaaaaaaaabxvxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h7w_A_771 | 1h7w | A | FMNFLAVIN MONONUCLEOTIDE | T - 793 |
1hbn_C_98 | 1hbn | C | GOLGLYCEROL | R - 108 |
1hbn_C_98 | 1hbn | C | GOLGLYCEROL | Y - 109 |
1hbn_C_98 | 1hbn | C | GOLGLYCEROL | R - 110 |
1hbn_C_98 | 1hbn | C | GOLGLYCEROL | G - 111 |
1hbn_C_98 | 1hbn | C | GL3THIOGLYCIN | T - 116 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h7w_A_771 | 1h7w | A | AC5FMN BINDING SITE FOR CHAIN A | T - 793 |
Clusters included in this Subclass |
CLUSTER: HE.4.210 |