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Information on SUBCLASS 4.16.1
Subclass Accession number: 305
Subclass: 4.16.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2 (>50 %)  
GO : GO:0000287 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 10.5 +/- 14.2
Average RMSD (Å) : 1.000 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XpXpXXXp
(φψ)-conformation: aapabpbb
Pattern: [CSV]x[EF][IY][GQT]xx[ILM]x[EH][KL][DKS][EF]xx[EKT][PVW][DV][FVY]
Conservation:-0.475-1.2790.0882.011-0.877-0.877-1.0111.400-0.3412.0440.3380.0610.088-0.609-0.7430.061-1.1450.4040.864
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hgx_A_501hgx   A5068VFFYTDLLKHLDFQLEPDYHHHHHHHHTT--S--EEEEaaaaaaaaaaxabxbbwbb
1jqe_A_1201jqe   A120138SSEYQSRMLEKKELQKWDFHHHHHHHHTTSSS---EEEaaaaaaaaaababxxxbab
1mv8_A_971mv8   A103121CREIGFAIREKSERHTVVVHHHHHHHHTT--S--EEEEaaaaaaaaaaxaxxbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 120
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 121
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE M - 141
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 142
1mv8_A_971mv8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 98
1mv8_A_971mv8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 101
1mv8_A_971mv8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 102
1mv8_A_971mv8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 105

Clusters included in this Subclass
CLUSTER: HE.8.31