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Information on SUBCLASS 4.3.4
Subclass Accession number: 3055
Subclass: 4.3.4 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.94.2 (>50 %)  4.2.1 (>50 %)  4.2.1.46
GO : GO:0004746 (>75 %)  GO:0008460 (>50 %)  GO:0016765 (>75 %)  GO:0016835 (>50 %)  GO:0016836 (>50 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51751 (>50 %)  52120 (>75 %)  52121 (>75 %)  52122 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 37.3 +/- 16.7
Average RMSD (Å) : 0.367 +/- 0.058

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: hIpGXTXH
(φψ)-conformation: bbpbabaa
Pattern: [AV][IV][I][APT][IL][G][TV][LV][I][KR][G][AS][T][MPT][H][FY][DE][Y][IV][ACS][DNS][ES][ATV][AST][HK][AG][IL][AM][NQ][AL][AQS]x[EKT][LTV]
Conservation:-0.5390.2700.542-0.976-0.0011.680-0.456-0.2720.5420.3001.680-0.2691.111-1.1652.8180.9530.5142.2490.270-0.660-0.470-0.325-0.913-0.660-0.254-0.111-0.001-0.723-0.035-0.815-0.913-1.545-0.913-0.913
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ejb_A_831ejb   A83116VVIPIGVLIKGSTMHFEYISDSTTHALMNLQEKVEEEEEEEEE--SSSHHHHHHHHHHHHHHHHHHHHbbbwbbbbbpbaxaaaaaaaaaaaaaaaaaaaaa
1nqu_A_741nqu   A74107AVIAIGVLIRGATPHFDYIASEVSKGLANLSLELEEEEEEEEE--SSTHHHHHHHHHHHHHHHHHHHHbbbxbbbbbxbabaaaaaaaaaaaaaaaaaaaaa
1rvv_1_741rvv   174107AIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTEEEEEEEEE--SSSHHHHHHHHHHHHHHHHHHHHbbbbbbbbbpbabaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID G - 88
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID V - 89
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID L - 90
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID I - 91
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID K - 92
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID G - 93
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID S - 94
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID T - 95
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID M - 96
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID H - 97
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID F - 98
1ejb_A_831ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID I - 101
1nqu_A_741nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE G - 79
1nqu_A_741nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE V - 80
1nqu_A_741nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE L - 81
1nqu_A_741nqu   A     PO4PHOSPHATE ION I - 82
1nqu_A_741nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE I - 82
1nqu_A_741nqu   A     PO4PHOSPHATE ION R - 83
1nqu_A_741nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE R - 83
1nqu_A_741nqu   A     PO4PHOSPHATE ION G - 84
1nqu_A_741nqu   A     PO4PHOSPHATE ION A - 85
1nqu_A_741nqu   A     PO4PHOSPHATE ION T - 86
1nqu_A_741nqu   A     PO4PHOSPHATE ION P - 87
1nqu_A_741nqu   A     PO4PHOSPHATE ION H - 88
1nqu_A_741nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE H - 88
1nqu_A_741nqu   A     PO4PHOSPHATE ION F - 89
1nqu_A_741nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE F - 89
1nqu_A_741nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE I - 92
1rvv_1_741rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE G - 79
1rvv_1_741rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE T - 80
1rvv_1_741rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE V - 81
1rvv_1_741rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE I - 82
1rvv_1_741rvv   1     PO4PHOSPHATE ION T - 87
1rvv_1_741rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE H - 88
1rvv_1_741rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE Y - 89
1rvv_1_741rvv   1     PO4PHOSPHATE ION Y - 89
1rvv_1_741rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE V - 92

Clusters included in this Subclass
CLUSTER: EH.4.264