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Information on SUBCLASS 4.6.1
Subclass Accession number: 3071
Subclass: 4.6.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 16.1 +/- 18.3
Average RMSD (Å) : 1.128 +/- 0.303

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hpXpXpXp
(φψ)-conformation: bbapapaa
Pattern: [GILTV][ilmv][AFGILMV][cfiklmv][dkst]x[adekns][dehnpst][dehnqrst][adenp][dekrs][adegnrst][afiklmv]xxx[aflmvy]
Conservation:0.3782.6780.643-0.0551.101-1.0340.236-0.824-0.4560.6080.002-0.6960.036-1.017-1.319-0.9700.688
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a04_A_821a04   A8399IVVFSVSNHEEDVVTALEEEEE----HHHHHHHHbbxbbaxaxaaaaaaaa
1bud_A_1231bud   A124140GVIQDHSSVNRLVAITLEEEE---SSHHHHHHHHbbbxxabaxaaaaaaaa
1dcf_A_851dcf   A86102LVALSGNTDKSTKEKCMEEEEES--SHHHHHHHHbbxbbabapaaaaaaaa
1e8c_A_3521e8c   A352368TVVVDYAHTPDALEKALEEEEE---SHHHHHHHHxbbbbapabaaaaaaaa
1fiu_A_2151fiu   A216232IVVVTAEPTPSRISSIAEEEEE----HHHHHHHHbbbbbapaxaaaaaaaa
1i3c_A_941i3c   A94110VVVLTTSHNEDDVIASYEEEEES---HHHHHHHHbbxbbaxaxaaaaaaaa
1i5g_A_641i5g   A6682VMLISWDESAEDFKDYYEEEEE--SSHHHHHHHHbbxbxaxabaaaaaaaa
1i7q_A_1901i7q   A193209LQASVFSEQASEAQRLQEEEEE----HHHHHHHHbbbbbaxaxaaaaaaaa
1k66_A_951k66   A95111VVIMTTSSNPKDIEICYEEEEES---HHHHHHHHbbxbbaxapaaaaaaaa
1k68_A_961k68   A96112VVVLSTSINEDDIFHSYEEEEES---HHHHHHHHbbxbbaxaxaaaaaaaa
1knv_A_1911knv   A194210GVGLKTSLRPDRRLQLVEEEEES---HHHHHHHHbbxbbabapaaaaaaaa
1nxo_A_751nxo   A7591ILMLSAKDSEFDKVIGLEEEEES--SHHHHHHHHbbxbbaxaxaaaaaaaa
1o73_A_631o73   A6581VVLISWDENESDFHDYYEEEEE--SSHHHHHHHHbbxbxaxabaaaaaaaa
1o8x_A_631o8x   A6581VVFCTWDEEEDGFAGYFEEEEE---SHHHHHHHHbbxbxaxabaaaaaaaa
1oxb_B_11691oxb   B11691185IVALTAFADDSNIKECLEEEEES--SHHHHHHHHbbxbbaxaxaaaaaaaa
1p2f_A_731p2f   A7490VILLTLLSDDESVLKGFEEEEES--SHHHHHHHHbbxbbabaxaaaaaaaa
1qua_A_1231qua   A124140GLIQDHSAIPLLMAVTMEEEE---S-HHHHHHHHbbbxxabaxaaaaaaaa
4aig_*_1234aig   -124140GIVKDHSPINLLVAVTMEEEE---S-HHHHHHHHbbbxxabaxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bud_A_1231bud   A     ZN3ZINC ION, 1 WATER COORDINATED H - 142
1bud_A_1231bud   A     ZN3ZINC ION, 1 WATER COORDINATED E - 143
1bud_A_1231bud   A     ZN3ZINC ION, 1 WATER COORDINATED H - 146
1e8c_A_3521e8c   A     MSESELENOMETHIONINE V - 354
1e8c_A_3521e8c   A     MSESELENOMETHIONINE V - 355
1e8c_A_3521e8c   A     MSESELENOMETHIONINE D - 356
1e8c_A_3521e8c   A     MSESELENOMETHIONINE Y - 357
1e8c_A_3521e8c   A     API2,6-DIAMINOPIMELIC ACID Y - 357
1e8c_A_3521e8c   A     MSESELENOMETHIONINE A - 358
1e8c_A_3521e8c   A     MSESELENOMETHIONINE H - 359
1e8c_A_3521e8c   A     API2,6-DIAMINOPIMELIC ACID H - 359
1e8c_A_3521e8c   A     MSESELENOMETHIONINE T - 360
1e8c_A_3521e8c   A     MSESELENOMETHIONINE P - 361
1e8c_A_3521e8c   A     MSESELENOMETHIONINE L - 364
1e8c_A_3521e8c   A     MSESELENOMETHIONINE K - 366
1e8c_A_3521e8c   A     MSESELENOMETHIONINE A - 367
1e8c_A_3521e8c   A     MSESELENOMETHIONINE L - 368
1e8c_A_3521e8c   A     MSESELENOMETHIONINE A - 370
1e8c_A_3521e8c   A     MSESELENOMETHIONINE A - 371
1e8c_A_3521e8c   A     MSESELENOMETHIONINE R - 372
1i3c_A_941i3c   A     MSESELENOMETHIONINE L - 97
1i5g_A_641i5g   A     TS5GLUTATHIONYLSPERMIDINE W - 71
1k68_A_961k68   A     PHDASPARTYL PHOSPHATE V - 97
1k68_A_961k68   A     PHDASPARTYL PHOSPHATE V - 98
1k68_A_961k68   A     PHDASPARTYL PHOSPHATE L - 99
1k68_A_961k68   A     PHDASPARTYL PHOSPHATE S - 100
1k68_A_961k68   A     PHDASPARTYL PHOSPHATE T - 101
1k68_A_961k68   A     PHDASPARTYL PHOSPHATE S - 102
1p2f_A_731p2f   A     MSESELENOMETHIONINE L - 77
1p2f_A_731p2f   A     MSESELENOMETHIONINE L - 79
1p2f_A_731p2f   A     MSESELENOMETHIONINE A - 92
1qua_A_1231qua   A     ZNZINC ION H - 142
1qua_A_1231qua   A     ZNZINC ION E - 143
1qua_A_1231qua   A     ZNZINC ION H - 146
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID H - 129
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID L - 135
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID V - 138
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID T - 139
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID H - 142
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID E - 143
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID H - 146

Clusters included in this Subclass
CLUSTER: EH.3.46
CLUSTER: EH.4.372
CLUSTER: EH.4.57
CLUSTER: EH.5.23