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Information on SUBCLASS 4.62.1
Subclass Accession number: 3171
Subclass: 4.62.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0000287 (>75 %)  
SCOP : 100948 (>75 %)  52498 (>75 %)  52499 (>75 %)  52517 (>75 %)  52518 (>75 %)  88749 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 30.3 +/- 16.5
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: GhXXphhV
(φψ)-conformation: ebwaaFaa
Pattern: [QRT][ILV][VY][IL][C][G][IV]x[AT][EHN][IVY][CG][V]xx[ST][AT]x[DN][A][LWY][EKS]
Conservation:-0.690-0.047-0.3550.1653.2841.7060.411-0.923-0.115-0.222-0.456-0.2830.654-1.216-0.9820.129-0.253-1.1570.4910.654-0.281-0.514
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1im5_A_1221im5   A122143RVYICGVATEYCVRATALDALKEEEEEEE-TTTHHHHHHHHHHHbbbbbebwaaFaaaaaaaaaaa
1j2r_A_1341j2r   A134155TIVLCGISTNIGVESTARNAWEEEEEEEE-TTTHHHHHHHHHHHbbxbbebwaaaaaaaaaaaaaa
1nf9_A_1441nf9   A144165QLVLCGVYAHVGVLISTVDAYSEEEEEEE-TTTHHHHHHHHHHHbbbbbebwaaFaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j2r_A_1341j2r   A     MPD2-METHYL-2,4-PENTANEDIOL I - 140
1j2r_A_1341j2r   A     MPD2-METHYL-2,4-PENTANEDIOL S - 141
1j2r_A_1341j2r   A     MPD2-METHYL-2,4-PENTANEDIOL I - 144
1j2r_A_1341j2r   A     MPD2-METHYL-2,4-PENTANEDIOL G - 145
1j2r_A_1341j2r   A     MPD2-METHYL-2,4-PENTANEDIOL W - 154
1nf9_A_1441nf9   A     BOGB-OCTYLGLUCOSIDE H - 153
1nf9_A_1441nf9   A     BOGB-OCTYLGLUCOSIDE L - 157

Clusters included in this Subclass
CLUSTER: EH.5.339