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Information on SUBCLASS 5.8.1
Subclass Accession number: 3226
Subclass: 5.8.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 16.7 +/- 17.7
Average RMSD (Å) : 1.015 +/- 0.316

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hchXXXphX
(φψ)-conformation: bbaaabpaa
Pattern: [fhilmvy][agitv][FITVY][DGNPQ][agpst][egknrst]xx[DGNST][afilpvy]x[adekqt][aefl][ilmv][AEKNQR]x[afiklv]
Conservation:0.145-0.3701.3471.619-0.734-0.709-0.490-0.9061.399-1.011-0.9440.003-0.5971.5971.142-0.981-0.509
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f8f_A_2381f8f   A238254HVINSKTQDPVAAIKEIEEEETTTS-HHHHHHHHbbbxaaabxaaaaaaaa
1ff3_A_931ff3   A98114IVYDPSVISYEQLLQVFEEE-TTTS-HHHHHHHHbbbbaaabxaaaaaaaa
1fvg_A_1141fvg   A119135VVFQPEHISFEELLKVFEEE-TTTS-HHHHHHHHbxbbaaabxaaaaaaaa
1hr6_B_3341hr6   B340356IVTDSNEHNVRLIVNEIEEEETTT--HHHHHHHHbbbxaaabxaaaaaaaa
1ixk_A_461ixk   A4763FRVNTLKISVQDLVKRLEEE-TTTS-HHHHHHHHbbxxaaabxaaaaaaaa
1jvb_A_2191jvb   A219235YVINASMQDPLAEIRRIEEEETTTS-HHHHHHHHbbbxaaabxaaaaaaaa
1lfp_A_1341lfp   A140156IEVPAKEVSEEELLEKAEEEEGGGS-HHHHHHHHbbbpaaabbaaaaaaaa
1llu_A_2171llu   A217233LTVNARQEDPVEAIQRDEEEETTTS-HHHHHHHHbbbxaaabxaaaaaaaa
1nwa_A_511nwa   A5672IIFDPTVTDYRTLLEFFEEE-TTT--HHHHHHHHbbbxaaabbaaaaaaaa
1qor_A_1881qor   A188204QVINYREEDLVERLKEIEEEETTTS-HHHHHHHHbbbxaaaxxaaaaaaaa
1qw9_A_1221qw9   A125141MAVNLGTRGIDAARNLVEEE--SS--HHHHHHHHxbxxaaabbaaaaaaaa
1rjw_A_2111rjw   A211227LVVNPLKEDAAKFMKEKEEE-TTTS-HHHHHHHHbbbbaaabxaaaaaaaa
1usl_A_1071usl   A108124IGIGGRMHTVAEALAIVEEEEGGGS-HHHHHHHHbxbxaaabxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f8f_A_2381f8f   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 242
1ff3_A_931ff3   A     CASS-(DIMETHYLARSENIC)CYSTEINE E - 94
1fvg_A_1141fvg   A     MSESELENOMETHIONINE E - 115
1fvg_A_1141fvg   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE E - 115
1fvg_A_1141fvg   A     MSESELENOMETHIONINE V - 116
1fvg_A_1141fvg   A     MSESELENOMETHIONINE V - 117
1fvg_A_1141fvg   A     MSESELENOMETHIONINE R - 118
1fvg_A_1141fvg   A     MSESELENOMETHIONINE V - 119
1fvg_A_1141fvg   A     MSESELENOMETHIONINE V - 120
1fvg_A_1141fvg   A     MSESELENOMETHIONINE F - 121
1fvg_A_1141fvg   A     MSESELENOMETHIONINE F - 128
1fvg_A_1141fvg   A     MSESELENOMETHIONINE V - 134
1fvg_A_1141fvg   A     MSESELENOMETHIONINE F - 135
1fvg_A_1141fvg   A     MSESELENOMETHIONINE W - 136
1fvg_A_1141fvg   A     MSESELENOMETHIONINE E - 137
1ixk_A_461ixk   A     MSESELENOMETHIONINE C - 46
1ixk_A_461ixk   A     MSESELENOMETHIONINE F - 47
1ixk_A_461ixk   A     MSESELENOMETHIONINE R - 48
1ixk_A_461ixk   A     MSESELENOMETHIONINE L - 52
1lfp_A_1341lfp   A     MSESELENOMETHIONINE F - 134
1lfp_A_1341lfp   A     MSESELENOMETHIONINE E - 135
1llu_A_2171llu   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 221
1llu_A_2171llu   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 222
1qor_A_1881qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 192
1qor_A_1881qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 193
1rjw_A_2111rjw   A     ETFTRIFLUOROETHANOL P - 215

Clusters included in this Subclass
CLUSTER: EH.4.155
CLUSTER: EH.5.37
CLUSTER: EH.7.147