Information on SUBCLASS 6.48.1 |
Subclass Accession number: 3388
Subclass: 6.48.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004463 (>50 %) GO:0016801 (>50 %) GO:0016803 (>50 %) SCOP : 53473 (>75 %) 53474 (>75 %) 53525 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 18.1 +/- 15.3 Average RMSD (Å) : 0.567 +/- 0.153 Consensus geometry
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Consensus Sequence: | LhHXhhXXhh |
(φψ)-conformation: | bbpbbwbbaa |
Pattern: | x | [FIV] | [ACV] | [L] | [CIL] | [H] | [GT] | [FIW] | [CP] | x | [GS] | [AFW] | [VWY] | x | [FW] | [HRY] | x | x | [IKL] | [PQ] | [AL] | [FL] | [AER] | [AEQ] |
Conservation: | -0.715 | -0.124 | -0.321 | 1.057 | -0.190 | 3.420 | 0.005 | -0.190 | 0.277 | -0.584 | 0.125 | -0.453 | -0.124 | -1.109 | 2.124 | 0.007 | -0.847 | -0.847 | -0.847 | 0.522 | -0.273 | 0.125 | -0.650 | -0.387 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1qj4_A_5 | 1qj4 | A | 5 | 28 | HFVLIHTICHGAWIWHKLKPLLEA | EEEEE--TT--GGGGTTHHHHHHH | bxbxbxxxvbbaaaaaaaaaaaaa |
1qo7_A_109 | 1qo7 | A | 110 | 133 | PIALLHGWPGSFVEFYPILQLFRE | EEEEE--SS--GGGGHHHHHHHHH | wbbbbxbbwxbaaaaaaaaaaaaa |
1vj5_A_258 | 1vj5 | A | 258 | 281 | AVCLCHGFPESWYSWRYQIPALAQ | EEEEE--TT--GGGGTTHHHHHHH | xbxxbxbbwFbaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qj4_A_5 | 1qj4 | A | GOLGLYCEROL | T - 11 |
1qj4_A_5 | 1qj4 | A | GOLGLYCEROL | I - 12 |
1qj4_A_5 | 1qj4 | A | GOLGLYCEROL | C - 13 |
1qj4_A_5 | 1qj4 | A | GOLGLYCEROL | H - 14 |
1vj5_A_258 | 1vj5 | A | CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA | F - 265 |
1vj5_A_258 | 1vj5 | A | CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA | P - 266 |
Clusters included in this Subclass |
CLUSTER: EH.11.51 |