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Information on SUBCLASS 6.48.1
Subclass Accession number: 3388
Subclass: 6.48.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004463 (>50 %)  GO:0016801 (>50 %)  GO:0016803 (>50 %)  
SCOP : 53473 (>75 %)  53474 (>75 %)  53525 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 18.1 +/- 15.3
Average RMSD (Å) : 0.567 +/- 0.153

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: LhHXhhXXhh
(φψ)-conformation: bbpbbwbbaa
Pattern: x[FIV][ACV][L][CIL][H][GT][FIW][CP]x[GS][AFW][VWY]x[FW][HRY]xx[IKL][PQ][AL][FL][AER][AEQ]
Conservation:-0.715-0.124-0.3211.057-0.1903.4200.005-0.1900.277-0.5840.125-0.453-0.124-1.1092.1240.007-0.847-0.847-0.8470.522-0.2730.125-0.650-0.387
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1qj4_A_51qj4   A528HFVLIHTICHGAWIWHKLKPLLEAEEEEE--TT--GGGGTTHHHHHHHbxbxbxxxvbbaaaaaaaaaaaaa
1qo7_A_1091qo7   A110133PIALLHGWPGSFVEFYPILQLFREEEEEE--SS--GGGGHHHHHHHHHwbbbbxbbwxbaaaaaaaaaaaaa
1vj5_A_2581vj5   A258281AVCLCHGFPESWYSWRYQIPALAQEEEEE--TT--GGGGTTHHHHHHHxbxxbxbbwFbaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qj4_A_51qj4   A     GOLGLYCEROL T - 11
1qj4_A_51qj4   A     GOLGLYCEROL I - 12
1qj4_A_51qj4   A     GOLGLYCEROL C - 13
1qj4_A_51qj4   A     GOLGLYCEROL H - 14
1vj5_A_2581vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA F - 265
1vj5_A_2581vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA P - 266

Clusters included in this Subclass
CLUSTER: EH.11.51