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PDB code:

Information on SUBCLASS 4.46.1

Subclass Accession number: 340 Subclass: 4.46.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>50 %)  1.1.1 (>50 %)   SCOP : 51734 (>50 %)  51735 (>50 %)  51848 (>50 %)

Number of loops: 3 Average sequence ID (%) : 6.7 +/- 9.0 Average RMSD (Å) : 0.567 +/- 0.153 Consensus geometry d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bte_A_18	1bte	A	18	27	WERDRTNQTG	HHHHTS-SEE	aaaavbxabe
1dmh_A_207	1dmh	A	212	221	LNQLGRHGNR	HHHTT---EE	aaaavbxabb
1ku0_A_79	1ku0	A	82	91	AAKHGHARFG	HHHHTS-SEE	aaaavbpabF

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	N - 24
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	T - 26
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	G - 27
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	V - 28
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	E - 29
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	P - 30
1dmh_A_207	1dmh	A	LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE	Q - 210
1dmh_A_207	1dmh	A	LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE	L - 211
1dmh_A_207	1dmh	A	LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE	Q - 214
1dmh_A_207	1dmh	A	FEFE (III) ION	R - 221
1dmh_A_207	1dmh	A	MCT4-METHYLCATECHOL	R - 221
1ku0_A_79	1ku0	A	ZN2ZINC ION ON 3-FOLD CRYSTAL AXIS	H - 81
1ku0_A_79	1ku0	A	ZN2ZINC ION ON 3-FOLD CRYSTAL AXIS	H - 85
1ku0_A_79	1ku0	A	ZN2ZINC ION ON 3-FOLD CRYSTAL AXIS	H - 87

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1bte_A_18	1bte	A	NAGGLYCOSYLATION SITE	N - 24

Clusters included in this Subclass

CLUSTER: HE.4.209

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