ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 7.16.1

Subclass Accession number: 3436
Subclass: 7.16.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 65.6 +/- 17.9
Average RMSD (Å) : 0.240 +/- 0.055

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	EVhhDGcHDhp
(φψ)-conformation:	pppapeappaa

Pattern:	[V]	[P]	[I]	[V]	[E]	[P]	[E]	[IV]	[ILM]	[IP]	[D]	[G]	[DKT]	[H]	[D]	[IL]	[DEK]	[HRT]	[AC]	[Q]	[KRY]	[V]	[ST]	[EQ]	[HKT]	[V]	[LW]	[ARS]	[AE]	[V]	[VY]	[AKS]	[A]	[L]	[HNQS]	[DR]
Conservation:	0.237	1.846	0.237	0.237	0.773	1.846	0.773	-0.010	-0.524	-1.207	1.309	1.309	-1.279	2.382	1.309	-0.299	-0.618	-1.224	0.333	0.773	-1.139	0.237	-0.423	0.022	-1.281	0.237	-0.498	-1.235	-0.978	0.237	-0.671	-1.131	0.237	0.237	-1.089	-0.958

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ado_A_183	1ado	A	183	218	VPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSD	EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHH	xxxxbwxxpaxeaxxaaaaaaaaaaaaaaaaaaaaa
1epx_A_193	1epx	A	193	228	VPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQR	EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHH	xwbxbwxxxapeaxxaaaaaaaaaaaaaaaaaaaaa
1f2j_A_193	1f2j	A	193	228	VPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALHR	EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHH	xxxxbwxxxapeaxbaaaaaaaaaaaaaaaaaaaaa
1fba_A_183	1fba	A	183	218	VPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSD	EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHH	xxxxbwxxxapeaxxaaaaaaaaaaaaaaaaaaaaa
1fdj_A_1183	1fdj	A	1183	1218	VPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALND	EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHH	xxxxbwxxxapeaxxaaaaaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ado_A_183	1ado	A	13P1,3-DIHYDROXYACETONEPHOSPHATE	E - 187
1ado_A_183	1ado	A	13P1,3-DIHYDROXYACETONEPHOSPHATE	E - 189
1fdj_A_1183	1fdj	A	2FP1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM)	E - 1187
1fdj_A_1183	1fdj	A	2FP1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM)	E - 1189

Clusters included in this Subclass