Information on SUBCLASS 7.46.1 |
Subclass Accession number: 3466
Subclass: 7.46.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003677 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 4.5 +/- 6.7 Average RMSD (Å) : 1.667 +/- 0.115 Consensus geometry
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Consensus Sequence: | XXXpXXXhXXX |
(φψ)-conformation: | bpaapaaalaa |
Pattern: | [GIV] | [FLV] | [FTV] | x | [DGQ] | x | [KTY] | x | x | x | [CM] | [NP] | x | [IKV] | x | [ADV] | [ILY] | x | x | x | x | [AKN] |
Conservation: | -0.322 | 0.644 | 0.040 | -0.201 | 0.282 | -0.805 | -0.201 | 0.161 | -0.563 | -0.805 | 3.426 | 1.705 | -0.805 | 0.040 | -1.046 | -0.563 | 0.764 | -0.926 | -0.563 | 0.143 | -0.443 | 0.040 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ac5_*_374 | 1ac5 | - | 376 | 397 | VLFNGDKDLICNNKGVLDTIDN | EEEEETT-STT-HHHHHHHHHH | bbxbxaaxaaapaaaaaaaaaa |
1k87_A_399 | 1k87 | A | 400 | 421 | GFVIQAYQKRCPLVIDYLIDLA | EEEEETTBTTHHHHHHHHHHHH | bbxbxaaxaaaaaaaaaaaaaa |
1tmy_*_50 | 1tmy | - | 50 | 71 | IVTMDITMPEMNGIDAIKEIMK | EEEEE-S-GGG-HHHHHHHHHH | bbbbxaabaaalaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ac5_*_374 | 1ac5 | * | NAGN-ACETYL-D-GLUCOSAMINE | E - 374 |
1ac5_*_374 | 1ac5 | * | NAGN-ACETYL-D-GLUCOSAMINE | D - 381 |
1ac5_*_374 | 1ac5 | * | NAGN-ACETYL-D-GLUCOSAMINE | K - 382 |
1k87_A_399 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 402 |
1k87_A_399 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Q - 404 |
1k87_A_399 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 406 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ac5_*_374 | 1ac5 | * | 383MEMBER OF CATALYTIC TRIAD. | D - 383 |
1tmy_*_50 | 1tmy | * | ACTACTIVE SITE AND METAL BINDING SITE. | D - 54 |
Clusters included in this Subclass |
CLUSTER: EH.6.283 |