Information on SUBCLASS 9.30.1 |
Subclass Accession number: 3546
Subclass: 9.30.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005525 (>75 %) GO:0019001 (>75 %) SCOP : 52539 (>75 %) 52540 (>75 %) 52592 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 43.9 +/- 11.6 Average RMSD (Å) : 0.400 +/- 0.000 Consensus geometry
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Consensus Sequence: | hNKppLhpAXXhX |
(φψ)-conformation: | pplaapaapppaa |
Pattern: | [ILV] | [L] | [IV] | [AF] | [AC] | [N] | [K] | [QS] | [DE] | [L] | [FLP] | [NT] | [A] | x | [NP] | [AP] | [AS] | [EK] | [I] | [AKT] | [DE] | [AGK] |
Conservation: | -0.194 | 0.757 | 0.418 | -0.799 | -0.034 | 2.184 | 1.471 | -0.364 | 0.693 | 0.757 | -1.858 | -0.117 | 0.757 | -1.462 | -0.264 | -0.611 | -0.260 | 0.096 | 0.757 | -1.303 | 0.759 | -1.383 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fzq_A_121 | 1fzq | A | 121 | 142 | VLIFANKQDLLTAAPASEIAEG | EEEEEE-TTSTT---HHHHHHH | bbbxxxvaaxaaxxxaaaaaaa |
1nrj_B_149 | 1nrj | B | 149 | 170 | ILIACNKSELFTARPPSKIKDA | EEEEEE-TTSTT---HHHHHHH | bbxxxxvaaxaaxxxaaaaaaa |
1r8s_A_120 | 1r8s | A | 121 | 142 | LLVFANKQDLPNAMNAAEITDK | EEEEEE-TTSTT---HHHHHHH | bbbxxxvaaxaaxxxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fzq_A_121 | 1fzq | A | GDPGUANOSINE-5'-DIPHOSPHATE | N - 126 |
1fzq_A_121 | 1fzq | A | GDPGUANOSINE-5'-DIPHOSPHATE | K - 127 |
1fzq_A_121 | 1fzq | A | GDPGUANOSINE-5'-DIPHOSPHATE | Q - 128 |
1fzq_A_121 | 1fzq | A | GDPGUANOSINE-5'-DIPHOSPHATE | D - 129 |
1fzq_A_121 | 1fzq | A | GDPGUANOSINE-5'-DIPHOSPHATE | L - 130 |
1nrj_B_149 | 1nrj | B | GTPGUANOSINE-5'-TRIPHOSPHATE | N - 154 |
1nrj_B_149 | 1nrj | B | GTPGUANOSINE-5'-TRIPHOSPHATE | K - 155 |
1nrj_B_149 | 1nrj | B | GTPGUANOSINE-5'-TRIPHOSPHATE | S - 156 |
1nrj_B_149 | 1nrj | B | GTPGUANOSINE-5'-TRIPHOSPHATE | E - 157 |
1nrj_B_149 | 1nrj | B | GTPGUANOSINE-5'-TRIPHOSPHATE | L - 158 |
Clusters included in this Subclass |
CLUSTER: EH.8.113 |