Information on SUBCLASS 12.4.1 |
Subclass Accession number: 3581
Subclass: 12.4.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.6 (>75 %) 2.6 (>75 %) 2.6.1 (>75 %) 2.6.1 (>75 %) 2.6.1.1 (>75 %) 2.6.1.1 (>75 %) GO : GO:0004069 (>75 %) GO:0004069 (>75 %) GO:0008483 (>75 %) GO:0008483 (>75 %) GO:0016769 (>75 %) GO:0016769 (>75 %) SCOP : 53382 (>75 %) 53382 (>75 %) 53383 (>75 %) 53383 (>75 %) 53384 (>75 %) 53384 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 50.3 +/- 22.8 Average RMSD (Å) : 0.240 +/- 0.055 Consensus geometry
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Consensus Sequence: | LHhChHNPTGhDPTXE |
(φψ)-conformation: | bpablpbwalpbppaa |
Pattern: | [IMV] | [FIV] | [LV] | [FL] | [H] | [AGS] | [CF] | [AC] | [H] | [N] | [P] | [T] | [G] | [AILTV] | [DN] | [LP] | [RT] | x | [DE] | [Q] | [W] | [akv] | [EQT] | [IL] | [AV] | [DQS] | [AILV] | [ilmv] | [aek] | [EKRS] |
Conservation: | -0.300 | -0.565 | -0.335 | -0.366 | 1.780 | -0.598 | 0.193 | -0.102 | 1.780 | 1.004 | 1.392 | 0.617 | 1.004 | -0.933 | 0.172 | -0.387 | -0.358 | -1.322 | 0.155 | 0.617 | 2.942 | -1.105 | -0.593 | -0.154 | -0.441 | -0.679 | -0.709 | -0.902 | -1.105 | -0.701 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ajs_A_185 | 1ajs | A | 185 | 214 | IFVLHACAHNPTGTDPTPEQWKQIASVMKR | EEEEESSS-TTT-----HHHHHHHHHHHHH | xbxbxablpbwavbbxxaaaaaaaaaaaaa |
1qis_A_185 | 1qis | A | 185 | 214 | VVLFHGFCHNPTGIDPTLEQWQTLAQLSVE | EEEEE-SS-TTT-----HHHHHHHHHHHHH | xbxbxablpbwavxbxxaaaaaaaaaaaaa |
1yaa_A_185 | 1yaa | A | 185 | 214 | IFVLHSCAHNPTGLDPTSEQWVQIVDAIAS | EEEEE-SS-TTT-----HHHHHHHHHHHHH | xbxbxablpbwavbbxxaaaaaaaaaaaaa |
2ay1_A_185 | 2ay1 | A | 185 | 214 | MVLLHGCCHNPTGANLTLDQWAEIASILEK | EEEEESSS-TTT-----HHHHHHHHHHHHH | bbxbxablpbwavxbxxaaaaaaaaaaaaa |
7aat_A_185 | 7aat | A | 185 | 214 | IILLHACAHNPTGVDPRQEQWKELASVVKK | EEEEESSS-TTT-----HHHHHHHHHHHHH | bbxbxablpbwavxbxxaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ajs_A_185 | 1ajs | A | PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID | H - 189 |
1ajs_A_185 | 1ajs | A | PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID | N - 194 |
1qis_A_185 | 1qis | A | PLPPYRIDOXAL-5'-PHOSPHATE | H - 189 |
1qis_A_185 | 1qis | A | PLPPYRIDOXAL-5'-PHOSPHATE | C - 192 |
1qis_A_185 | 1qis | A | PLPPYRIDOXAL-5'-PHOSPHATE | N - 194 |
1qis_A_185 | 1qis | A | MAEMALEIC ACID | N - 194 |
7aat_A_185 | 7aat | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 192 |
Clusters included in this Subclass |
CLUSTER: EH.11.16 |