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Information on SUBCLASS 12.4.1
Subclass Accession number: 3581
Subclass: 12.4.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.6 (>75 %)  2.6 (>75 %)  2.6.1 (>75 %)  2.6.1 (>75 %)  2.6.1.1 (>75 %)  2.6.1.1 (>75 %)  
GO : GO:0004069 (>75 %)  GO:0004069 (>75 %)  GO:0008483 (>75 %)  GO:0008483 (>75 %)  GO:0016769 (>75 %)  GO:0016769 (>75 %)  
SCOP : 53382 (>75 %)  53382 (>75 %)  53383 (>75 %)  53383 (>75 %)  53384 (>75 %)  53384 (>75 %)  
Number of loops: 5

Average sequence ID (%) : 50.3 +/- 22.8
Average RMSD (Å) : 0.240 +/- 0.055

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: LHhChHNPTGhDPTXE
(φψ)-conformation: bpablpbwalpbppaa
Pattern: [IMV][FIV][LV][FL][H][AGS][CF][AC][H][N][P][T][G][AILTV][DN][LP][RT]x[DE][Q][W][akv][EQT][IL][AV][DQS][AILV][ilmv][aek][EKRS]
Conservation:-0.300-0.565-0.335-0.3661.780-0.5980.193-0.1021.7801.0041.3920.6171.004-0.9330.172-0.387-0.358-1.3220.1550.6172.942-1.105-0.593-0.154-0.441-0.679-0.709-0.902-1.105-0.701
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ajs_A_1851ajs   A185214IFVLHACAHNPTGTDPTPEQWKQIASVMKREEEEESSS-TTT-----HHHHHHHHHHHHHxbxbxablpbwavbbxxaaaaaaaaaaaaa
1qis_A_1851qis   A185214VVLFHGFCHNPTGIDPTLEQWQTLAQLSVEEEEEE-SS-TTT-----HHHHHHHHHHHHHxbxbxablpbwavxbxxaaaaaaaaaaaaa
1yaa_A_1851yaa   A185214IFVLHSCAHNPTGLDPTSEQWVQIVDAIASEEEEE-SS-TTT-----HHHHHHHHHHHHHxbxbxablpbwavbbxxaaaaaaaaaaaaa
2ay1_A_1852ay1   A185214MVLLHGCCHNPTGANLTLDQWAEIASILEKEEEEESSS-TTT-----HHHHHHHHHHHHHbbxbxablpbwavxbxxaaaaaaaaaaaaa
7aat_A_1857aat   A185214IILLHACAHNPTGVDPRQEQWKELASVVKKEEEEESSS-TTT-----HHHHHHHHHHHHHbbxbxablpbwavxbxxaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ajs_A_1851ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID H - 189
1ajs_A_1851ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID N - 194
1qis_A_1851qis   A     PLPPYRIDOXAL-5'-PHOSPHATE H - 189
1qis_A_1851qis   A     PLPPYRIDOXAL-5'-PHOSPHATE C - 192
1qis_A_1851qis   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 194
1qis_A_1851qis   A     MAEMALEIC ACID N - 194
7aat_A_1857aat   A     PLPPYRIDOXAL-5'-PHOSPHATE A - 192

Clusters included in this Subclass
CLUSTER: EH.11.16