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Information on SUBCLASS 13.2.1
Subclass Accession number: 3589
Subclass: 13.2.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 76.4 +/- 9.9
Average RMSD (Å) : 0.340 +/- 0.207

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: AhSREQpNXpGXpMYIQ
(φψ)-conformation: bbaaabbpaalppppaa
Pattern: [f][r][lv][dt][fy][a][iv][s][r][e][q][ktv][n][adep][akq][g][eg][kr][m][y][i][q][dt][r][mv]
Conservation:1.2040.616-0.819-0.9330.5180.028-0.2610.0280.6160.6160.616-1.7601.204-1.810-1.5281.204-1.297-0.2530.6161.7920.0280.616-1.0080.616-0.653
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fnc_*_2271fnc   -227251FRLDFAVSREQTNEKGEKMYIQTRMEEEEEEETTT-B-TT--B--HHHHHbbbbbbxaaabbxaavxxxxaaaaa
1gaw_A_2271gaw   A227251FRVDYAVSREQTNAAGERMYIQTRMEEEEEEETTT-B-TT--B--HHHHHbbbbbbbaaabbxaavxpxxaaaaa
1ogi_A_2161ogi   A216240FRLTYAISREQKNPQGGRMYIQDRVEEEEEEETTT-B-TTSSB--HHHHHbbbbbbbaaabbxaavxxxbaaaaa
1qfz_A_2211qfz   A221245FRLDFAVSREQVNDKGEKMYIQTRMEEEEEEETTT-B-TT--B--HHHHHbbbbxbxaaabbxaavxpxxaaaaa
1sm4_A_2751sm4   A275299FRLDFAVSREQTNEKGEKMYIQTRMEEEEEEETTT-B-TTS-B--HHHHHbbbbxbbaaNbbxaavxxxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fnc_*_2271fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE A - 232
1fnc_*_2271fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE V - 233
1fnc_*_2271fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE S - 234
1fnc_*_2271fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE R - 235
1fnc_*_2271fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE K - 244
1fnc_*_2271fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE M - 245
1fnc_*_2271fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE Y - 246
1fnc_*_2271fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE I - 247
1fnc_*_2271fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE Q - 248
1qfz_A_2211qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 226
1qfz_A_2211qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 227
1qfz_A_2211qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 228
1qfz_A_2211qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 229
1qfz_A_2211qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 238
1qfz_A_2211qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 240
1qfz_A_2211qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 241
1qfz_A_2211qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 242
1sm4_A_2751sm4   A     PO4PHOSPHATE ION S - 282
1sm4_A_2751sm4   A     PO4PHOSPHATE ION R - 283
1sm4_A_2751sm4   A     PO4PHOSPHATE ION K - 292
1sm4_A_2751sm4   A     PO4PHOSPHATE ION Y - 294
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ogi_A_2161ogi   A AC2SO4 BINDING SITE FOR CHAIN AS - 223
1ogi_A_2161ogi   A AC2SO4 BINDING SITE FOR CHAIN AR - 224
1ogi_A_2161ogi   A AC2SO4 BINDING SITE FOR CHAIN AR - 233
1ogi_A_2161ogi   A AC2SO4 BINDING SITE FOR CHAIN AY - 235

Clusters included in this Subclass
CLUSTER: EH.12.9