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Information on SUBCLASS 5.7.1
Subclass Accession number: 362
Subclass: 5.7.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005489 (>75 %)  GO:0005506 (>75 %)  GO:0046914 (>75 %)  
SCOP : 54861 (>75 %)  54862 (>75 %)  
 Number of loops: 13

Average sequence ID (%) : 42.1 +/- 26.5
Average RMSD (Å) : 0.469 +/- 0.210

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pXCPXchhp
(φψ)-conformation: aapaalabb
Pattern: [AC][afmv][adegknt][agimtv][C][P][nstv][ADEGNQ][acl][FIMP][dhknsty]
Conservation:0.689-0.557-0.787-0.6412.1541.515-0.543-0.450-0.273-0.377-0.731
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fxr_A_441fxr   A5060AMDTCPVQCIHHHHH-TT--EEaaaapaalabb
1h0h_B_1511h0h   B152162CVTSCPTGAMNHHHH-SSS-EEaaaaxaavaxb
1h98_A_151h98   A1626CVEVCPVECIYHHHH-TT--EEaaaaxaalabb
1h98_A_451h98   A4555CVPACPVNAIYHHHH-TT--EEaaaaxaalaxb
1iqz_A_511iqz   A5767AFEGCPTDSIKHHHH-TT--EEaaaaxaalaxb
1jnr_B_201jnr   B2131CEYICPNDLMTHHHH-TTS-EEaaaapaalaxb
1jnr_B_521jnr   B5363CVKMCPQGAIDHHHH-TT--EEaaaaxaalabb
1kqf_B_1741kqf   B175185CVKTCPTGAIHHHHH-TTS-EEaaaapaavaxb
1q16_B_1911q16   B192202CVATCPSGAIYHHHT-TT--EEaaaaxaavaxb
1vjw_*_431vjw   -4757AADSCPTGAISHHHH-TT--EEaaaaxaavaxb
1xer_*_881xer   -8999CVNVCPVAAIDHHHH-TT--EEaaaaxaalabb
2fdn_*_422fdn   -4353CAGVCPVDAPVHHHT-TT--EEaaaaxaalawb
7fd1_A_157fd1   A1626CVEVCPVDCFYHHHH-TT--EEaaaaxaalaxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fxr_A_441fxr   A     FS4IRON/SULFUR CLUSTER A - 50
1fxr_A_441fxr   A     FS4IRON/SULFUR CLUSTER T - 53
1fxr_A_441fxr   A     FS4IRON/SULFUR CLUSTER C - 54
1fxr_A_441fxr   A     FS4IRON/SULFUR CLUSTER P - 55
1fxr_A_441fxr   A     FS4IRON/SULFUR CLUSTER V - 56
1fxr_A_441fxr   A     FS4IRON/SULFUR CLUSTER Q - 57
1fxr_A_441fxr   A     FS4IRON/SULFUR CLUSTER C - 58
1fxr_A_441fxr   A     FS4IRON/SULFUR CLUSTER I - 59
1h0h_B_1511h0h   B     SSULFUR ATOM A - 151
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER A - 151
1h0h_B_1511h0h   B     SSULFUR ATOM C - 152
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER C - 152
1h0h_B_1511h0h   B     SSULFUR ATOM V - 153
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER V - 153
1h0h_B_1511h0h   B     SSULFUR ATOM S - 155
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER S - 155
1h0h_B_1511h0h   B     SSULFUR ATOM C - 156
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER C - 156
1h0h_B_1511h0h   B     SSULFUR ATOM P - 157
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER P - 157
1h0h_B_1511h0h   B     SSULFUR ATOM T - 158
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER T - 158
1h0h_B_1511h0h   B     SSULFUR ATOM G - 159
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER G - 159
1h0h_B_1511h0h   B     SSULFUR ATOM A - 160
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER A - 160
1h0h_B_1511h0h   B     SSULFUR ATOM M - 161
1h0h_B_1511h0h   B     FS4IRON/SULFUR CLUSTER M - 161
1h98_A_151h98   A     FS3FE3-S4 CLUSTER S - 15
1h98_A_151h98   A     FS4IRON/SULFUR CLUSTER C - 16
1h98_A_151h98   A     FS3FE3-S4 CLUSTER C - 16
1h98_A_151h98   A     FS3FE3-S4 CLUSTER V - 17
1h98_A_151h98   A     FS4IRON/SULFUR CLUSTER V - 19
1h98_A_151h98   A     FS4IRON/SULFUR CLUSTER C - 20
1h98_A_151h98   A     FS4IRON/SULFUR CLUSTER P - 21
1h98_A_151h98   A     FS4IRON/SULFUR CLUSTER V - 22
1h98_A_151h98   A     FS4IRON/SULFUR CLUSTER E - 23
1h98_A_151h98   A     FS4IRON/SULFUR CLUSTER C - 24
1h98_A_151h98   A     FS4IRON/SULFUR CLUSTER I - 25
1h98_A_151h98   A     FS3FE3-S4 CLUSTER I - 25
1h98_A_451h98   A     FS4IRON/SULFUR CLUSTER C - 45
1h98_A_451h98   A     FS4IRON/SULFUR CLUSTER V - 46
1h98_A_451h98   A     FS3FE3-S4 CLUSTER A - 48
1h98_A_451h98   A     FS3FE3-S4 CLUSTER C - 49
1h98_A_451h98   A     FS3FE3-S4 CLUSTER P - 50
1h98_A_451h98   A     FS3FE3-S4 CLUSTER V - 51
1h98_A_451h98   A     FS3FE3-S4 CLUSTER N - 52
1h98_A_451h98   A     FS3FE3-S4 CLUSTER A - 53
1h98_A_451h98   A     FS4IRON/SULFUR CLUSTER I - 54
1h98_A_451h98   A     FS3FE3-S4 CLUSTER I - 54
1iqz_A_511iqz   A     SULSULFATE ANION D - 52
1iqz_A_511iqz   A     SULSULFATE ANION D - 53
1iqz_A_511iqz   A     SULSULFATE ANION D - 56
1iqz_A_511iqz   A     FS4IRON/SULFUR CLUSTER A - 57
1iqz_A_511iqz   A     FS4IRON/SULFUR CLUSTER G - 60
1iqz_A_511iqz   A     FS4IRON/SULFUR CLUSTER C - 61
1iqz_A_511iqz   A     FS4IRON/SULFUR CLUSTER P - 62
1iqz_A_511iqz   A     FS4IRON/SULFUR CLUSTER T - 63
1iqz_A_511iqz   A     FS4IRON/SULFUR CLUSTER D - 64
1iqz_A_511iqz   A     FS4IRON/SULFUR CLUSTER S - 65
1iqz_A_511iqz   A     FS4IRON/SULFUR CLUSTER I - 66
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER A - 20
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER C - 21
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER E - 22
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER I - 24
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER C - 25
1jnr_B_201jnr   B     FADFLAVIN-ADENINE DINUCLEOTIDE P - 26
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER P - 26
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER N - 27
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER D - 28
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER L - 29
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER M - 30
1jnr_B_201jnr   B     FS4IRON/SULFUR CLUSTER L - 32
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER S - 52
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER C - 53
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER V - 54
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER M - 56
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER C - 57
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER P - 58
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER Q - 59
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER A - 61
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER I - 62
1jnr_B_521jnr   B     FS4IRON/SULFUR CLUSTER V - 64
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER A - 174
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER C - 175
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER V - 176
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER T - 178
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER C - 179
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER P - 180
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER T - 181
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER G - 182
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER A - 183
1kqf_B_1741kqf   B     FS4IRON/SULFUR CLUSTER I - 184
1vjw_*_431vjw   *     FS4IRON/SULFUR CLUSTER A - 47
1vjw_*_431vjw   *     FS4IRON/SULFUR CLUSTER S - 50
1vjw_*_431vjw   *     FS4IRON/SULFUR CLUSTER C - 51
1vjw_*_431vjw   *     FS4IRON/SULFUR CLUSTER P - 52
1vjw_*_431vjw   *     FS4IRON/SULFUR CLUSTER G - 54
1vjw_*_431vjw   *     FS4IRON/SULFUR CLUSTER A - 55
1vjw_*_431vjw   *     FS4IRON/SULFUR CLUSTER I - 56
1xer_*_881xer   *     FS3FE3-S4 CLUSTER A - 88
1xer_*_881xer   *     FS3FE3-S4 CLUSTER C - 89
1xer_*_881xer   *     FS3FE3-S4 CLUSTER V - 90
1xer_*_881xer   *     FS3FE3-S4 CLUSTER V - 92
1xer_*_881xer   *     FS3FE3-S4 CLUSTER C - 93
1xer_*_881xer   *     FS3FE3-S4 CLUSTER P - 94
1xer_*_881xer   *     FS3FE3-S4 CLUSTER V - 95
1xer_*_881xer   *     FS3FE3-S4 CLUSTER A - 96
1xer_*_881xer   *     FS3FE3-S4 CLUSTER A - 97
1xer_*_881xer   *     FS3FE3-S4 CLUSTER I - 98
1xer_*_881xer   *     FS3FE3-S4 CLUSTER V - 100
2fdn_*_422fdn   *     FS4IRON/SULFUR CLUSTER A - 42
2fdn_*_422fdn   *     FS4IRON/SULFUR CLUSTER C - 43
2fdn_*_422fdn   *     FS4IRON/SULFUR CLUSTER A - 44
2fdn_*_422fdn   *     FS4IRON/SULFUR CLUSTER C - 47
2fdn_*_422fdn   *     FS4IRON/SULFUR CLUSTER P - 48
2fdn_*_422fdn   *     FS4IRON/SULFUR CLUSTER V - 49
2fdn_*_422fdn   *     FS4IRON/SULFUR CLUSTER D - 50
2fdn_*_422fdn   *     FS4IRON/SULFUR CLUSTER A - 51
7fd1_A_157fd1   A     FS3FE3-S4 CLUSTER D - 15
7fd1_A_157fd1   A     FS4IRON/SULFUR CLUSTER D - 23
7fd1_A_157fd1   A     FS4IRON/SULFUR CLUSTER F - 25
7fd1_A_157fd1   A     FS3FE3-S4 CLUSTER F - 25
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h0h_B_1511h0h   B AC8FS4 BINDING SITE FOR CHAIN BC - 156
1h0h_B_1511h0h   B AC8FS4 BINDING SITE FOR CHAIN BT - 158
1h0h_B_1511h0h   B AC8FS4 BINDING SITE FOR CHAIN BM - 161
1h98_A_151h98   A FS3CYSTEINE RESIDUES 8, 16 AND 49 COORDINATE THE FS3S - 15
1h98_A_151h98   A FS3CYSTEINE RESIDUES 8, 16 AND 49 COORDINATE THE FS3C - 16
1h98_A_151h98   A FS4CYSTEINE RESIDUES 20, 39, 42 AND 45 COORDINATE THE FS4C - 20
1h98_A_151h98   A FS4CYSTEINE RESIDUES 20, 39, 42 AND 45 COORDINATE THE FS4C - 24
1h98_A_451h98   A FS4CYSTEINE RESIDUES 20, 39, 42 AND 45 COORDINATE THE FS4C - 45
1h98_A_451h98   A FS3CYSTEINE RESIDUES 8, 16 AND 49 COORDINATE THE FS3C - 49

Clusters included in this Subclass
CLUSTER: HE.4.66
CLUSTER: HE.5.39
CLUSTER: HE.5.69
CLUSTER: HE.6.17