Information on SUBCLASS 16.10.1 |
Subclass Accession number: 3621
Subclass: 16.10.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 49817 (>75 %) 49818 (>75 %) 49823 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 63.0 +/- -8.9 Average RMSD (Å) : 0.367 +/- 0.115 Consensus geometry
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Consensus Sequence: | VEpXpXXNGXCYPGchXchE |
(φψ)-conformation: | bbpaapapFpappebpplaa |
Pattern: | [I] | [V] | [E] | [RT] | [PS] | [NS] | [AS] | x | [N] | [G] | [IMT] | [C] | [Y] | [P] | [G] | [DN] | [FV] | x | [DN] | [LY] | [E] | [E] | [L] | [R] | [ES] | x | [FL] |
Conservation: | 0.075 | 0.075 | 0.553 | -0.877 | -0.556 | -0.375 | -0.640 | -1.360 | 1.032 | 1.032 | -1.200 | 2.467 | 1.510 | 1.510 | 1.032 | -0.161 | -0.852 | -1.487 | -0.161 | -0.719 | 0.553 | 0.553 | 0.075 | 0.553 | -0.746 | -1.223 | -0.665 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jsd_A_79 | 1jsd | A | 79 | 105 | IVERPSAVNGMCYPGNVENLEELRSLF | EEE-TT--BS--SS--BTTHHHHHHHH | bbbxaaxaxFxaxpebxxlaaaaaaaa |
1rv0_H_83 | 1rv0 | H | 83 | 109 | IVETSNSDNGTCYPGDFIDYEELREQL | EEE-TT--BS-SS---BTTHHHHHHHH | bbbxaaxaxFxaxpexbplaaaaaaaa |
1rvx_A_83 | 1rvx | A | 83 | 109 | IVETPNSENGICYPGDFIDYEELREQL | EEE-TT--BS-SSSS-BTTHHHHHHHH | bbbbaaxaxFxaxpebxxlaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1rv0_H_83 | 1rv0 | H | NAGN-ACETYL-D-GLUCOSAMINE | N - 88 |
1rv0_H_83 | 1rv0 | H | NAGN-ACETYL-D-GLUCOSAMINE | D - 90 |
1rv0_H_83 | 1rv0 | H | NAGN-ACETYL-D-GLUCOSAMINE | N - 91 |
1rv0_H_83 | 1rv0 | H | NAGN-ACETYL-D-GLUCOSAMINE | G - 92 |
1rv0_H_83 | 1rv0 | H | NAGN-ACETYL-D-GLUCOSAMINE | T - 93 |
1rv0_H_83 | 1rv0 | H | NAGN-ACETYL-D-GLUCOSAMINE | C - 94 |
1rvx_A_83 | 1rvx | A | SIAO-SIALIC ACID | Y - 95 |
Clusters included in this Subclass |
CLUSTER: EH.15.17 |