ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 3.6.3

Subclass Accession number: 3804
Subclass: 3.6.3

Type: AR beta-beta link
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 8

Average sequence ID (%) : 17.1 +/- 21.5
Average RMSD (Å) : 0.638 +/- 0.213

Consensus geometry

d (Å): 9

delta (°): 45-90

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	XXpXcpX
(φψ)-conformation:	bbpplbb

Pattern:	[FIVY]	x	x	[KNRSTY]	[kpr]	[EGKN]	[AKST]	x	[hily]
Conservation:	1.368	-2.075	-0.333	-0.259	0.751	0.765	0.493	-0.319	-0.392

Loops included in this Subclass

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1f42_A_273	1f42	A	MNB5-MERCAPTO-2-NITRO-BENZOIC ACID	S - 285
1f42_A_273	1f42	A	MNB5-MERCAPTO-2-NITRO-BENZOIC ACID	R - 287
1gui_A_63	1gui	A	BGCBETA-D-GLUCOSE	Q - 64
1gui_A_63	1gui	A	BGCBETA-D-GLUCOSE	N - 66
1gui_A_63	1gui	A	GOLGLYCEROL	K - 82
1gui_A_63	1gui	A	GOLGLYCEROL	K - 84
1gw0_A_216	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	N - 216
1gw0_A_216	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	V - 217
1gw0_A_216	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	T - 218
1gw0_A_216	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	L - 227
2phl_A_53	2phl	A	PO4PHOSPHATE ION	E - 56
2phl_A_53	2phl	A	PO4PHOSPHATE ION	F - 57
2phl_A_53	2phl	A	PO4PHOSPHATE ION	R - 58

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1gui_A_63	1gui	A	AC9BGC BINDING SITE FOR CHAIN A	Q - 64
1gui_A_63	1gui	A	AC9BGC BINDING SITE FOR CHAIN A	N - 66
1gui_A_63	1gui	A	AC4GOL BINDING SITE FOR CHAIN A	K - 82
1gui_A_63	1gui	A	AC3GOL BINDING SITE FOR CHAIN A	K - 84
1gw0_A_216	1gw0	A	BC6NAG BINDING SITE FOR CHAIN A	N - 216
1gw0_A_216	1gw0	A	BC6NAG BINDING SITE FOR CHAIN A	T - 218

Clusters included in this Subclass