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Information on SUBCLASS 5.28.1
Subclass Accession number: 389
Subclass: 5.28.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>50 %)  2.7 (>75 %)  2.7.3 (>50 %)  2.7.3.22.7.4 (>75 %)  2.7.4.3 (>75 %)  
GO : GO:0004017 (>75 %)  GO:0004111 (>50 %)  GO:0005524 (>75 %)  GO:0016301 (>50 %)  GO:0016301 (>75 %)  GO:0016772 (>50 %)  GO:0016772 (>75 %)  GO:0016775 (>50 %)  GO:0016776 (>75 %)  GO:0019205 (>75 %)  GO:0030554 (>75 %)  
SCOP : 52539 (>75 %)  52540 (>75 %)  52541 (>75 %)  55930 (>50 %)  55931 (>50 %)  55935 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 12.1 +/- 12.4
Average RMSD (Å) : 0.833 +/- 0.252

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XphXXEphX
(φψ)-conformation: aappaaabb
Pattern: xx[HKM][DRT][ALV][DP]x[E][DHT][LWY]x
Conservation:-0.389-0.237-0.313-0.466-0.1601.147-0.9992.356-0.2370.450-1.152
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1doi_*_231doi   -2838SDMDLDDEDYGHHS---TTTEEaaxaxxaaabe
1nw1_A_671nw1   A6777AWKTVPLEHLRHHHH--GGGEEaaaapxaaabb
1rhs_*_2741rhs   -278288WFHRAPPETWVHHHHS-GGGEEaaaaxxaaabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1rhs_*_2741rhs   *     CSSS-MERCAPTOCYSTEINE S - 274
1rhs_*_2741rhs   *     CSSS-MERCAPTOCYSTEINE W - 275
1rhs_*_2741rhs   *     CSSS-MERCAPTOCYSTEINE F - 276

Clusters included in this Subclass
CLUSTER: HE.6.87