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Information on SUBCLASS 5.30.1
Subclass Accession number: 391
Subclass: 5.30.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 5.3 (>75 %)  5.3.1 (>75 %)  5.3.1.9
GO : GO:0004347 (>75 %)  GO:0016853 (>75 %)  GO:0016860 (>75 %)  GO:0016861 (>75 %)  
SCOP : 53696 (>75 %)  53697 (>75 %)  53701 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 21.7 +/- 18.4
Average RMSD (Å) : 0.733 +/- 0.153

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXpDpXXhV
(φψ)-conformation: aapaababb
Pattern: xx[ADK][GIL][ERS]xx[V][NQS][AEQ][LTW][IKL][AN][RS][D][DR][TV][DPQ][GLV][V]x[IV][LT]
Conservation:-0.799-1.104-0.646-1.028-0.264-0.799-0.5701.5680.117-0.112-0.417-0.646-0.1690.0912.9420.2750.378-0.112-1.0281.568-0.7221.2460.231
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d2n_A_5201d2n   A526548LDDGELLVQQTKNSDRTPLVSVLHHHHHHHHHHHHH-SS-SEEEEEaaaaaaaaaaaaaxaababbbbb
1mkz_A_541mkz   A5476RYAIRAQVSAWIASDDVQVVLITHHHHHHHHHHHHHSSS--EEEEEaaaaaaaaaaaaaxaaxabbbbb
1o7j_A_671o7j   A7092VLKLSQRVNELLARDDVDGVVITHHHHHHHHHHHHTSTT--EEEEEaaaaaaaaaaaaaxaababbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d2n_A_5201d2n   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 522
1mkz_A_541mkz   A     MSESELENOMETHIONINE V - 73
1mkz_A_541mkz   A     MSESELENOMETHIONINE L - 74
1mkz_A_541mkz   A     MSESELENOMETHIONINE I - 75
1mkz_A_541mkz   A     MSESELENOMETHIONINE T - 76
1o7j_A_671o7j   A     GOLGLYCEROL G - 67
1o7j_A_671o7j   A     GOLGLYCEROL D - 68
1o7j_A_671o7j   A     GOLGLYCEROL L - 71
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o7j_A_671o7j   A AC3GOL BINDING SITE FOR CHAIN AD - 68

Clusters included in this Subclass
CLUSTER: HE.6.146