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Information on SUBCLASS 5.38.1
Subclass Accession number: 399
Subclass: 5.38.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.162.7 (>50 %)  2.7.1 (>50 %)  2.7.1.69
GO : GO:0004766 (>75 %)  GO:0005351 (>50 %)  GO:0005386 (>50 %)  GO:0008168 (>75 %)  GO:0008757 (>75 %)  GO:0008982 (>50 %)  GO:0015144 (>50 %)  GO:0015290 (>50 %)  GO:0015291 (>50 %)  GO:0015455 (>50 %)  GO:0016741 (>75 %)  GO:0016765 (>75 %)  GO:0016772 (>50 %)  GO:0016773 (>50 %)  GO:0051119 (>50 %)  
SCOP : 52727 (>50 %)  52728 (>50 %)  52729 (>50 %)  53334 (>75 %)  53335 (>75 %)  69557 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 9.5 +/- 10.3
Average RMSD (Å) : 1.033 +/- 0.153

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hXhXXcphX
(φψ)-conformation: aabpaaabb
Pattern: x[ARS][AEM][AQT][AL]x[FL][DNP][AKL][DK][KT][IMV]x[GIY]
Conservation:-1.187-0.105-0.707-0.2260.486-1.0671.2020.375-0.8271.5631.0491.337-0.586-1.308
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ne9_A_2131ne9   A217230QRMQAAFDADTMRIHHHHHHS-TTTEEEaaaaaabxaaabbb
1s4n_A_3611s4n   A367380IAAALFLPKDKIHYHHHHHHS-GGGEEEaaaaaabxaaabbx
1zym_A_1651zym   A165178PSETAQLNLKKVLGHHHHHHS-GGGEEEaaaaaaxxaaNbae
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1s4n_A_3611s4n   A     GOLGLYCEROL D - 361
1s4n_A_3611s4n   A     GOLGLYCEROL A - 362
1s4n_A_3611s4n   A     GOLGLYCEROL P - 363

Clusters included in this Subclass
CLUSTER: HE.4.208