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Information on SUBCLASS 0.1.40
Subclass Accession number: 40
Subclass: 0.1.40 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008168 (>75 %)  GO:0008757 (>75 %)  GO:0016741 (>75 %)  
SCOP : 53334 (>75 %)  53335 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 3.7 +/- 7.5
Average RMSD (Å) : 0.500 +/- 0.100

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: pphX
(φψ)-conformation: aabb
Pattern: [EKL][ADV][FLM]x[EHT][HQ][AFY]x[ALY]
Conservation:-0.615-0.8080.637-0.808-0.0382.3230.251-0.423-0.519
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dpg_A_691dpg   A7381EAFIEHFSYHHHHTTEEEaaaaaabbb
1rjd_A_3111rjd   A315323KVMQTHYILHHHHTTEEEaaaaaabbb
2mas_A_1912mas   A191199LDLTHQALAHHHHTT-EEaaaaaaxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2mas_A_1912mas   A     PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL L - 191
2mas_A_1912mas   A     PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL T - 194

Clusters included in this Subclass
CLUSTER: HE.2.80