Logo
Information on SUBCLASS 5.7.1
Subclass Accession number: 4004
Subclass: 5.7.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 44.0 +/- 26.4
Average RMSD (Å) : 0.306 +/- 0.130

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: hXDFGhXpX
(φψ)-conformation: bblaaapbb
Pattern: [acilmv][kqry][ilv][acgilmtv][d][flw][g]x[astv][cehkrt]x
Conservation:-0.263-0.1060.331-0.8811.6920.6241.692-0.830-0.200-0.842-1.217
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cki_A_1501cki   A150160VYIIDFGLAKKEEE---SS-EExbbbvaaapbx
1cm8_A_1671cm8   A167177LKILDFGLARQEEE---TT-EEbbxblaaaxbx
1csn_*_1501csn   -150160IYVVDFGMVKFEEE---TT-EExbbbvaaaxbx
1gjo_A_6401gjo   A640650MKIADFGLARDEEE---SS-EExbxblaaaxbx
1ir3_A_11461ir3   A11461156VKIGDFGMTRDEEE---TT-EExbxblaaaxbx
1jks_A_1571jks   A157167IKIIDFGLAHKEEE---TT-EEbbxblaaaxbx
1k9a_A_3281k9a   A328338AKVSDFGLTKEEEE---TT-EExbxblaaaxbx
1m2r_A_1701m2r   A171181LRLIDWGLAEFEEE---TT-EEbbxblaaaxbx
1mq4_A_2701mq4   A270280LKIADFGWSVHEEE--GGG-EExbxbvaaaxbx
1na7_A_1701na7   A171181LRLIDWGLAEFEEE---SS-EEbbxblaaapbx
1nvr_A_1441nvr   A144154LKISDFGLATVEEE---TT-EExbxbvaaaxbx
1o6y_A_1521o6y   A152162VKVMDFGIARAEEE---TT-EExbxbvaaapbx
1phk_*_1631phk   -163173IKLTDFGFSCQEEE---TT-EExbxblaaaxbx
1q41_A_1961q41   A196206LKLCDFGSAKQEEE---TT-EEbbxbvaaaxbx
1q8y_A_5431q8y   A546556IKIADLGNACWEEE---TT-EEbbxblaaaxbx
1qpc_A_3781qpc   A378388CKIADFGLARLEEE---TT-EEbbxblaaaxbx
1rdq_E_1801rdq   E180190IQVTDFGFAKREEE---TT-EExbxbvaaaxbx
1uu3_A_2191uu3   A219229IQITDFGTAKVEEE---TT-EExbxbvaaaxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cm8_A_1671cm8   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 170
1cm8_A_1671cm8   A     MGMAGNESIUM ION D - 171
1cm8_A_1671cm8   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 171
1cm8_A_1671cm8   A     MGMAGNESIUM ION F - 172
1cm8_A_1671cm8   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER F - 172
1cm8_A_1671cm8   A     MGMAGNESIUM ION G - 173
1cm8_A_1671cm8   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 173
1cm8_A_1671cm8   A     TPOPHOSPHOTHREONINE L - 174
1cm8_A_1671cm8   A     PTRO-PHOSPHOTYROSINE L - 174
1cm8_A_1671cm8   A     MGMAGNESIUM ION L - 174
1cm8_A_1671cm8   A     TPOPHOSPHOTHREONINE A - 175
1cm8_A_1671cm8   A     TPOPHOSPHOTHREONINE R - 176
1csn_*_1501csn   *     ATPADENOSINE-5'-TRIPHOSPHATE V - 153
1csn_*_1501csn   *     ATPADENOSINE-5'-TRIPHOSPHATE D - 154
1csn_*_1501csn   *     MGMAGNESIUM ION D - 154
1ir3_A_11461ir3   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 1150
1ir3_A_11461ir3   A     MGMAGNESIUM ION D - 1150
1ir3_A_11461ir3   A     MGMAGNESIUM ION F - 1151
1ir3_A_11461ir3   A     MGMAGNESIUM ION G - 1152
1ir3_A_11461ir3   A     PTRO-PHOSPHOTYROSINE M - 1153
1ir3_A_11461ir3   A     PTRO-PHOSPHOTYROSINE R - 1155
1ir3_A_11461ir3   A     PTRO-PHOSPHOTYROSINE D - 1156
1m2r_A_1701m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE R - 172
1m2r_A_1701m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE I - 174
1m2r_A_1701m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE D - 175
1mq4_A_2701mq4   A     ADPADENOSINE-5'-DIPHOSPHATE A - 273
1mq4_A_2701mq4   A     MGMAGNESIUM ION D - 274
1mq4_A_2701mq4   A     ADPADENOSINE-5'-DIPHOSPHATE D - 274
1mq4_A_2701mq4   A     MGMAGNESIUM ION F - 275
1mq4_A_2701mq4   A     MGMAGNESIUM ION G - 276
1mq4_A_2701mq4   A     MGMAGNESIUM ION W - 277
1mq4_A_2701mq4   A     PO4PHOSPHATE ION W - 277
1mq4_A_2701mq4   A     PO4PHOSPHATE ION S - 278
1mq4_A_2701mq4   A     PO4PHOSPHATE ION V - 279
1nvr_A_1441nvr   A     STUSTAUROSPORINE S - 147
1nvr_A_1441nvr   A     STUSTAUROSPORINE D - 148
1nvr_A_1441nvr   A     STUSTAUROSPORINE F - 149
1o6y_A_1521o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER M - 155
1o6y_A_1521o6y   A     MGMAGNESIUM ION M - 155
1o6y_A_1521o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER D - 156
1o6y_A_1521o6y   A     MGMAGNESIUM ION D - 156
1o6y_A_1521o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 158
1o6y_A_1521o6y   A     MGMAGNESIUM ION G - 158
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE T - 166
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE D - 167
1phk_*_1631phk   *     MNMANGANESE (II) ION D - 167
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE F - 168
1phk_*_1631phk   *     MNMANGANESE (II) ION F - 168
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE G - 169
1phk_*_1631phk   *     MNMANGANESE (II) ION G - 169
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE F - 170
1phk_*_1631phk   *     MNMANGANESE (II) ION F - 170
1q41_A_1961q41   A     IXM(Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME C - 199
1q41_A_1961q41   A     IXM(Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME D - 200
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE A - 549
1q8y_A_5431q8y   A     MGMAGNESIUM ION D - 550
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE D - 550
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE L - 551
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE G - 552
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE N - 553
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL I - 380
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL A - 381
1qpc_A_3781qpc   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 382
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL D - 382
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL F - 383
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL G - 384
1qpc_A_3781qpc   A     PTRO-PHOSPHOTYROSINE L - 385
1qpc_A_3781qpc   A     PTRO-PHOSPHOTYROSINE R - 387
1qpc_A_3781qpc   A     PTRO-PHOSPHOTYROSINE L - 388
1rdq_E_1801rdq   E     MGMAGNESIUM ION T - 183
1rdq_E_1801rdq   E     ADPADENOSINE-5'-DIPHOSPHATE T - 183
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE T - 183
1rdq_E_1801rdq   E     PO4PHOSPHATE ION D - 184
1rdq_E_1801rdq   E     MGMAGNESIUM ION D - 184
1rdq_E_1801rdq   E     ADPADENOSINE-5'-DIPHOSPHATE D - 184
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE D - 184
1rdq_E_1801rdq   E     MGMAGNESIUM ION F - 185
1rdq_E_1801rdq   E     ADPADENOSINE-5'-DIPHOSPHATE F - 185
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE F - 185
1rdq_E_1801rdq   E     MGMAGNESIUM ION G - 186
1rdq_E_1801rdq   E     ADPADENOSINE-5'-DIPHOSPHATE G - 186
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE G - 186
1rdq_E_1801rdq   E     TPOPHOSPHOTHREONINE F - 187
1rdq_E_1801rdq   E     PO4PHOSPHATE ION F - 187
1rdq_E_1801rdq   E     MGMAGNESIUM ION F - 187
1rdq_E_1801rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE F - 187
1rdq_E_1801rdq   E     TPOPHOSPHOTHREONINE K - 189
1uu3_A_2191uu3   A     LY4(9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H,18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H] [1,4,13]OXADIAZACYCLOHEXADECINE-18,20-DIONE T - 222
1uu3_A_2191uu3   A     GOLGLYCEROL D - 223
1uu3_A_2191uu3   A     LY4(9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H,18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H] [1,4,13]OXADIAZACYCLOHEXADECINE-18,20-DIONE D - 223
1uu3_A_2191uu3   A     LY4(9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H,18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H] [1,4,13]OXADIAZACYCLOHEXADECINE-18,20-DIONE F - 224
1uu3_A_2191uu3   A     GOLGLYCEROL G - 225
1uu3_A_2191uu3   A     SEPPHOSPHOSERINE T - 226
1uu3_A_2191uu3   A     GOLGLYCEROL T - 226
1uu3_A_2191uu3   A     SEPPHOSPHOSERINE A - 227
1uu3_A_2191uu3   A     SEPPHOSPHOSERINE K - 228
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o6y_A_1521o6y   A MG1MG BINDING SITE FOR CHAIN AD - 156

Clusters included in this Subclass
CLUSTER: AR.5.19