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PDB code:

Information on SUBCLASS 7.4.1

Subclass Accession number: 4145 Subclass: 7.4.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 42 Average sequence ID (%) : 62.7 +/- 27.5 Average RMSD (Å) : 0.736 +/- 0.293 Consensus geometry d (Å): 21 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
12e8_H_107	12e8	H	108	124	LVTVSAAKTTPPSVYPL	EEEEE----B--EEEEE	xbbbbaxbxbxxbbbxb
1bjm_A_105	1bjm	A	106	122	KVTVLGQPKANPTVTLF	EEEE-SS--B--EEEEE	xbbxpabwxbxxbbbbb
1c5c_H_107	1c5c	H	108	124	LVTVSSASTKGPSVFPL	EEEE-----B--EEEEE	xbbbbaxbpbxxxbbxb
1c5d_B_111	1c5d	B	112	128	MVTVSSAQTTAPSVYPL	EEEE-SS--B--EEEEE	xbbxbaxbxbxxbbbxb
1cic_B_111	1cic	B	112	128	TLTVSSALTTPPSVYPL	EEEE-S---B--EEEEE	xbbbbaxxxbxxxbbxb
1cr9_H_104	1cr9	H	105	121	TLTVSSAKTTAPSVYPL	EEEE-SS--B--EEEEE	xbbxbaxxxbxxbbbwb
1dqq_B_107	1dqq	B	108	124	TVTVSSAKTTAPSVYPL	EEEE-----B--EEEEE	eObbbapxpbxxbbbxb
1flr_H_112	1flr	H	113	129	SVTVSSAKTTAPSVYPL	EEEE-S---B--EEEEE	xbbbbapbpbxxbbbwb
1h0d_B_107	1h0d	B	108	124	SVTVSSAKTTPPSVYPL	EEEE-S------EEEEE	xbbbbapxpbxxbbbxb
1jfq_H_415	1jfq	H	416	432	TLTVSSAGTTPPSVYPL	EEEE-S---B--EEEEE	xbbxbaxbpbxxbbbwb
1kb5_H_108	1kb5	H	108	124	TLTVSSAKTTAPSVYPL	EEEE--S--B--EEEEE	xbxbbapxpbxxbbbxb
1kcu_H_110	1kcu	H	111	127	TLTVSAAATTPPSVYPL	EEEE-----B--EEEEE	xbbxbapbpbpxbbbwb
1kcv_H_110	1kcv	H	111	127	NVTVSAASTTAPSVFPL	EEEE-SS--B--EEEEE	xbbbbaxbxbxxbbbxb
1l7i_H_107	1l7i	H	108	124	LVTVSSASTKGPSVFPL	EEEE-SS--B--EEEEE	xbbbbaxxxbxxxbbxb
1lk3_H_113	1lk3	H	114	130	LVTVSSAETTAPSVYPL	EEEE-S---B--EEEEE	xbbxbaxxxbxxbbbxb
1mex_H_107	1mex	H	108	124	TLTVSSGGTTPPSVYPL	EEEE-S---B--EEEEE	xbbbbaxxpbxxxbbxb
1mfb_L_104	1mfb	L	105	121	KLTVLGQPKSSPSVTLF	EEEE--S--B--EEEEE	xbxbpabwxbxxxbbbb
1mju_H_107	1mju	H	108	124	LVTVSAAKTTAPSVYPL	EEEE-SS--B--EEEEE	xxbxbaxxxbxxxbbwb
1ncw_H_107	1ncw	H	108	124	LVTVSAAKTTAPSVYPL	EEEE-S---B--EEEEE	xbbbbaxxpbxxxbbxb
1ndg_B_407	1ndg	B	408	424	LVTVSAAKTTAPSVYPL	EEEE-----B--EEEEE	xbbbbaxbpbxxbbbwb
1nj9_A_102	1nj9	A	103	119	KLTVLGQPKSSPSVTLF	EEEE--S-----EEEEE	xxxbpabpxbbxxbbxb
1nl0_L_102	1nl0	L	103	119	KLTVLGQPKAAPSVTLF	EEEE--S-----EEEEE	xbbxpabxxbxxxbbbb
1nlb_H_107	1nlb	H	108	124	TVTVSSAKTTPPSVYPL	EEEE-S---B--EEEEE	xbbbbaxxxbxxbbbxb
1osp_H_114	1osp	H	115	131	LVTVSAAKTTPPSVYPL	EEEE-SS-----EEEEE	xbbbbaxxxbxxbbbwb
1p2c_B_410	1p2c	B	411	427	TLTVSSASTTPPSVYPL	EEEE-S---B--EEEEE	xbbbbaxxxbxxbbbxb
1p7k_B_107	1p7k	B	108	124	SVTVSSAKTTPPSVYPL	EEEE-----B--EEEEE	xbbbbaxxpbxxxbbwb
1pz5_B_107	1pz5	B	108	124	SVTVSSATTTAPSVYPL	EEEE-SS--B--EEEEE	xbbbbaxbxbxxxbbxb
1q0x_L_102	1q0x	L	103	119	KLTVLGQPKSSPTVTLF	EEEE--S--B--EEEEE	xxxbxabpxbxxbbbbb
1q1j_L_102	1q1j	L	103	119	KLTVLSQPKAAPSVTLF	EEEE--S--B--EEEEE	xxbbpabxpbxxxbbbb
1q9r_B_105	1q9r	B	106	122	LVTVSAAKTTPPSVYPL	EEEE-SS--B--EEEEE	xbbbbaxxxbxxbbbxb
1rur_H_107	1rur	H	108	124	SVTVSSAKTTPPSVYPL	EEEE-SS--B--EEEEE	xbbbbaxxpbxxxbbxb
1rz8_B_107	1rz8	B	108	124	LVTVSSASTKGPSVFPL	EEEE--S--B--EEEEE	xbbxbaxxxbxxbbbxx
1rzf_H_107	1rzf	H	108	124	TVTVSSASTKGPSVFPL	EEEE-S---B--EEEEE	xbbbbaxbpbxxbbbxb
1rzg_A_107	1rzg	A	108	124	LVTVSPASTKGPSVFPL	EEEE-S---B--EEEEE	xbbbbaxbpbxxbbbxb
1sm3_H_107	1sm3	H	108	124	TVTVSSAKTTPPTVYPL	EEEE-----B--EEEEE	xbbbbaxxpbxxxxbxb
1ub5_A_110	1ub5	A	111	127	LVTVSSAKTTPPSVYPA	EEEE--S--B--EEEEE	xbbbbapxxbxxbbbxb
1ucb_H_107	1ucb	H	108	124	LVTVSVASTKGPSVFPL	EEEE-SS--B--EEEEE	xbbbbaxbxbxxbbbxb
1wej_H_111	1wej	H	112	128	TLTVSSAETTPPSVYPL	EEEE-----B--EEEEE	xbbbbaxbpbxxbbbxb
2f5b_H_126	2f5b	H	127	143	TVTISSTSTKGPSVFPL	EEEE-----B--EEEEE	xbbbbapxpbxxbbbxb
2fbj_H_112	2fbj	H	113	129	LVTVSAESARNPTIYPL	EEEE-SS--B--EEEEE	xbbbbaxxxbxxbbbxb
2jel_H_107	2jel	H	108	124	TVIVSSAATTPPSVYPL	EEEE-S---B--EEEEE	xbbbbaxxxbxxbxbwb
8fab_A_101	8fab	A	102	118	KLTVLGQPKAAPSVTLF	EEEE--S--B--EEEEE	xxbxpabwxbxxbbbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1c5c_H_107	1c5c	H	GOLGLYCEROL	L - 108
1c5c_H_107	1c5c	H	GOLGLYCEROL	T - 110
1h0d_B_107	1h0d	B	GOLGLYCEROL	P - 119
1h0d_B_107	1h0d	B	GOLGLYCEROL	S - 120
1h0d_B_107	1h0d	B	GOLGLYCEROL	V - 121
1h0d_B_107	1h0d	B	GOLGLYCEROL	Y - 122
1h0d_B_107	1h0d	B	GOLGLYCEROL	P - 123
1p7k_B_107	1p7k	B	1PEPENTAETHYLENE GLYCOL	S - 112
1p7k_B_107	1p7k	B	1PEPENTAETHYLENE GLYCOL	A - 114
1p7k_B_107	1p7k	B	1PEPENTAETHYLENE GLYCOL	K - 115
1p7k_B_107	1p7k	B	1PEPENTAETHYLENE GLYCOL	T - 116
1p7k_B_107	1p7k	B	1PEPENTAETHYLENE GLYCOL	T - 117
1rzf_H_107	1rzf	H	GOLGLYCEROL	F - 122

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1h0d_B_107	1h0d	B	GB1GOL BINDING SITE FOR CHAIN B	S - 120
1h0d_B_107	1h0d	B	GB1GOL BINDING SITE FOR CHAIN B	Y - 122

Clusters included in this Subclass

CLUSTER: AR.7.5

CLUSTER: AR.8.5

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