Information on SUBCLASS 9.23.1 |
Subclass Accession number: 4252
Subclass: 9.23.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005529 (>75 %) GO:0030246 (>75 %) SCOP : 49898 (>75 %) 49899 (>75 %) 49900 (>75 %) |
Number of loops: 2 Average sequence ID (%) : 45.2 +/- 0.0 Average RMSD (Å) : 0.400 +/- 0.000 Consensus geometry
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Consensus Sequence: | XTGhppchhpTpD |
(φψ)-conformation: | bbpappgpbbpbb |
Pattern: | [W] | [V] | [DR] | [FV] | [G] | [FL] | [S] | [AG] | [AT] | [T] | [G] | [AI] | [DQ] | [KR] | [DG] | [AY] | [AV] | [EQ] | [T] | [HN] | [D] | [V] | [LY] | [S] | [W] | [S] | [F] | [EQ] | [AS] | [NS] | [L] |
Conservation: | 3.046 | 0.004 | -0.974 | -0.866 | 0.873 | -0.648 | 0.004 | -0.648 | -0.757 | 0.438 | 0.873 | -1.083 | -0.540 | -0.214 | -0.648 | -0.974 | -0.866 | -0.214 | 0.438 | 0.004 | 0.873 | 0.004 | -0.757 | 0.004 | 3.046 | 0.004 | 0.873 | -0.214 | -0.648 | -0.431 | 0.004 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fny_A_205 | 1fny | A | 205 | 235 | WVRFGFSATTGIDKGYVQTNDVLSWSFESNL | EEEEEEEEEE-SSTT-----EEEEEEEEEEE | bbbbebbbbbxaxpgxbbxbbxabbbbbbbb |
1gzc_A_207 | 1gzc | A | 207 | 237 | WVDVGLSGATGAQRDAAETHDVYSWSFQASL | EEEEEEEEEE-SSTT-----EEEEEEEEEEE | bbbbbbbbbbxabpvxbbxbxbabbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gzc_A_207 | 1gzc | A | LATLACTOSE | T - 216 |
1gzc_A_207 | 1gzc | A | LATLACTOSE | G - 217 |
1gzc_A_207 | 1gzc | A | LATLACTOSE | A - 218 |
1gzc_A_207 | 1gzc | A | LATLACTOSE | Q - 219 |
1gzc_A_207 | 1gzc | A | LATLACTOSE | A - 222 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gzc_A_207 | 1gzc | A | LATLAT BINDING SITE FOR CHAIN A | G - 217 |
1gzc_A_207 | 1gzc | A | LATLAT BINDING SITE FOR CHAIN A | A - 218 |
1gzc_A_207 | 1gzc | A | LATLAT BINDING SITE FOR CHAIN A | Q - 219 |
1gzc_A_207 | 1gzc | A | LATLAT BINDING SITE FOR CHAIN A | A - 222 |
Clusters included in this Subclass |
CLUSTER: AR.9.62 |