Information on SUBCLASS 12.20.1 |
Subclass Accession number: 4301
Subclass: 12.20.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005489 (>75 %) SCOP : 54235 (>75 %) 54292 (>75 %) 54293 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 52.6 +/- 2.8 Average RMSD (Å) : 0.433 +/- 0.153 Consensus geometry
|
Consensus Sequence: | RLXCQIXhTXXhDchX |
(φψ)-conformation: | bpaaabppbaaapgpb |
Pattern: | [S] | [R] | [L] | [GST] | [C] | [Q] | [I] | [CIK] | [LMV] | [T] | [KPS] | [AEL] | [LM] | [D] | [GN] | [ILM] | [TV] | [V] | [DHR] |
Conservation: | 0.289 | 0.761 | 0.289 | -0.919 | 2.650 | 0.761 | 0.289 | -1.391 | -0.499 | 0.761 | -0.971 | -1.444 | -0.088 | 1.233 | -0.147 | -0.394 | -0.549 | 0.289 | -0.919 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ayf_A_88 | 1ayf | A | 88 | 106 | SRLGCQICLTKAMDNMTVR | EEEGGG-B--GGGTTEEEE | xbxaaabbxbaaapvxbbb |
1e9m_A_82 | 1e9m | A | 82 | 100 | SRLTCQIKVTSLLDGLVVH | EEEGGG-B--GGGTTEEEE | xbxaaabxxbaaaxgpbbb |
1oqq_A_82 | 1oqq | A | 82 | 100 | SRLSCQIIMTPELDGIVVD | EEEGGG-B--GGGTTEEEE | xbxaaaxxxbaaapvpbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ayf_A_88 | 1ayf | A | FESFE2/S2 (INORGANIC) CLUSTER | L - 90 |
1ayf_A_88 | 1ayf | A | FESFE2/S2 (INORGANIC) CLUSTER | G - 91 |
1ayf_A_88 | 1ayf | A | FESFE2/S2 (INORGANIC) CLUSTER | C - 92 |
1ayf_A_88 | 1ayf | A | FESFE2/S2 (INORGANIC) CLUSTER | Q - 93 |
1e9m_A_82 | 1e9m | A | FESFE2/S2 (INORGANIC) CLUSTER | L - 84 |
1e9m_A_82 | 1e9m | A | FESFE2/S2 (INORGANIC) CLUSTER | T - 85 |
1e9m_A_82 | 1e9m | A | FESFE2/S2 (INORGANIC) CLUSTER | C - 86 |
1e9m_A_82 | 1e9m | A | FESFE2/S2 (INORGANIC) CLUSTER | Q - 87 |
1oqq_A_82 | 1oqq | A | FESFE2/S2 (INORGANIC) CLUSTER | S - 85 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e9m_A_82 | 1e9m | A | FESBINDING SITE FOR FES (CLUSTER 2 IRONS-2 SULFURS) | C - 86 |
Clusters included in this Subclass |
CLUSTER: AR.11.25 |