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Information on SUBCLASS 13.5.1
Subclass Accession number: 4306
Subclass: 13.5.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 50412 (>75 %)  63380 (>75 %)  63381 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 76.4 +/- 1.4
Average RMSD (Å) : 0.175 +/- 0.050

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: YSIASpXhGDXhDXpTh
(φψ)-conformation: bppabpaaeaalalabb
Pattern: [R][L][Y][S][I][A][S][ST][AR][ILY][G][D][f][FG][D][AGS][KR][ST][GV][S][L][C][V][KR]
Conservation:0.5830.0691.6110.0690.0690.0690.069-0.586-1.098-1.1301.0971.097-1.208-1.2081.097-1.075-0.185-0.500-1.4970.0690.0692.6390.069-0.185
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fnc_*_931fnc   -93116RLYSIASSALGDFGDAKSVSLCVKEEEE--S-TTTTTTSS-EEEEEEEbxbxxabxaaeaavavabbbbbbx
1gaw_A_931gaw   A93116RLYSIASSAIGDFGDSKTVSLCVKEEEEB-S-SS-TTSSS-EEEEEEEbxbxxabxaaeaavalabbbbbbx
1jb9_A_911jb9   A91114RLYSIASTRYGDNFDGRTGSLCVREEEEB-S-TTTTTTSSSEEEEEEEbxbxxabxaaeaalavabbbbbbx
1sm4_A_1411sm4   A141164RLYSIASSALGDFGDSKTVSLCVKEEEEB-S-TT-TTSSS-EEEEEEEbxbxxabxaaeaavavabbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fnc_*_931fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE R - 93
1fnc_*_931fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE L - 94
1fnc_*_931fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE Y - 95
1fnc_*_931fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE S - 96
1fnc_*_931fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE I - 97
1fnc_*_931fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE C - 114
1fnc_*_931fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE V - 115
1fnc_*_931fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE K - 116
1fnc_*_931fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE K - 116
1gaw_A_931gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 93
1gaw_A_931gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 94
1gaw_A_931gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 95
1gaw_A_931gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 96
1gaw_A_931gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 97
1gaw_A_931gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 114
1gaw_A_931gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 115
1gaw_A_931gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 116
1jb9_A_911jb9   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 91
1jb9_A_911jb9   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 92
1jb9_A_911jb9   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 93
1jb9_A_911jb9   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 94
1jb9_A_911jb9   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 95
1jb9_A_911jb9   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 112
1jb9_A_911jb9   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 113
1jb9_A_911jb9   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 114
1sm4_A_1411sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 141
1sm4_A_1411sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 142
1sm4_A_1411sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 143
1sm4_A_1411sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 144
1sm4_A_1411sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 145
1sm4_A_1411sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 162
1sm4_A_1411sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 163
1sm4_A_1411sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 164

Clusters included in this Subclass
CLUSTER: AR.12.10