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Information on SUBCLASS 1.1.12
Subclass Accession number: 4359
Subclass: 1.1.12 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 15.9 +/- 19.2
Average RMSD (Å) : 0.618 +/- 0.183

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: XXphp
(φψ)-conformation: aapaa
Pattern: xxx[aklv][kl]x[dehnrs]x[adnqst]xx
Conservation:-1.0660.223-0.6770.7620.518-0.8001.1901.6810.356-1.323-0.864
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1byu_A_231byu   A2434TTFVKRHLTGEHHHHTTBHHHHaaaaaaxaaaa
1dk8_A_1261dk8   A126136LHSLLDDQDGIHHHHTT-HHHHaaaaaabaaaa
1emu_A_1261emu   A126136LHSLLDDQDGIHHHHTTSHHHHaaaaaabaaaa
1g9z_A_1121g9z   A112122LPSAKESPDKFHHHHTT-HHHHaaaaaapaaaa
1i7k_A_1501i7k   A152162AAELWKNPTAFHHHHTTSHHHHaaaaaabaaaa
1iap_A_491iap   A4959LEQVKRRPAHLHHHHTT-HHHHaaaaaabaaaa
1l0l_B_1341l0l   B148158KAVALQNPQAHHHHHTTSHHHHaaaaaabaaaa
1lm8_C_331lm8   C3343REHALTSGTIKHHHHTTSHHHHaaaaaaxaaaa
1n93_X_531n93   X5666NAVALLDQSRRHHHHTTSHHHHaaaaaaxaaaa
1nrl_A_3151nrl   A315325FQQLLLEPMLKHHHHTTSHHHHaaaaaaxaaaa
1us5_A_2721us5   A273283EAFKKIHPNLEHHHHTT-HHHHaaaaaabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1byu_A_231byu   A     MGMAGNESIUM ION K - 23
1byu_A_231byu   A     GDPGUANOSINE-5'-DIPHOSPHATE K - 23
1byu_A_231byu   A     MGMAGNESIUM ION T - 24
1byu_A_231byu   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 24
1byu_A_231byu   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 25
1byu_A_231byu   A     GDPGUANOSINE-5'-DIPHOSPHATE F - 26
1dk8_A_1261dk8   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE L - 126
1dk8_A_1261dk8   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE H - 127
1dk8_A_1261dk8   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE S - 128
1emu_A_1261emu   A     GOLGLYCEROL Q - 133
1emu_A_1261emu   A     GOLGLYCEROL D - 134
1emu_A_1261emu   A     GOLGLYCEROL I - 136
1emu_A_1261emu   A     GOLGLYCEROL S - 137
1nrl_A_3151nrl   A     SRL[2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER M - 323
1nrl_A_3151nrl   A     SRL[2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER L - 324
1nrl_A_3151nrl   A     SRL[2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER H - 327

Clusters included in this Subclass
CLUSTER: HH.4.42