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Information on SUBCLASS 1.1.30
Subclass Accession number: 4377
Subclass: 1.1.30 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 28.1 +/- 24.2
Average RMSD (Å) : 0.600 +/- 0.183

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XFXXp
(φψ)-conformation: aapaa
Pattern: [ENS][HW][KT][EKR][AL][HR][KNR][AIKM][L][KLT][DP][EGPS][F]xx[KQR][AKNR][IMV][KQR]
Conservation:-0.2511.197-0.1420.076-0.4860.5990.081-1.2731.182-0.9930.831-1.1042.536-0.725-1.4430.240-0.8500.2300.297
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jpz_A_941jpz   A95113NWKKAHNILLPSFSQQAMKHHHHHHHHHGGGGSHHHHHaaaaaaaaaaaaaxaaaaa
1lfk_A_951lfk   A95113EHTRLRRKLTPGFTLRKMQHHHHHHHHHGGGG-HHHHHaaaaaaaaaaaaaxaaaaa
1n97_A_841n97   A86104SWKEARKALKDPFLPKNVRHHHHHHHHH-GGGSHHHHHaaaaaaaaaaaaaxaaaaa
1ued_A_1041ued   A104122EHTRLRKMLTPEFTVRRIRHHHHHHHHHGGGSSHHHHHaaaaaaaaaaaaaxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jpz_A_941jpz   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 96
1jpz_A_941jpz   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 100
1jpz_A_941jpz   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 107
1lfk_A_951lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 96
1lfk_A_951lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 100
1lfk_A_951lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 103
1n97_A_841n97   A     EGLETHYLENE GLYCOL G - 84
1n97_A_841n97   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 87
1n97_A_841n97   A     EGLETHYLENE GLYCOL W - 87
1n97_A_841n97   A     EGLETHYLENE GLYCOL K - 88
1n97_A_841n97   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 91
1n97_A_841n97   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 98
1n97_A_841n97   A     EGLETHYLENE GLYCOL P - 100
1n97_A_841n97   A     EGLETHYLENE GLYCOL K - 101
1n97_A_841n97   A     EGLETHYLENE GLYCOL N - 102
1n97_A_841n97   A     EGLETHYLENE GLYCOL R - 104
1ued_A_1041ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 105
1ued_A_1041ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 109
1ued_A_1041ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 112
1ued_A_1041ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 116

Clusters included in this Subclass
CLUSTER: HH.4.247