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Information on SUBCLASS 8.3.1
Subclass Accession number: 453
Subclass: 8.3.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>75 %)  1.1 (>75 %)  1.1.1 (>75 %)  1.1.1 (>75 %)  1.1.1.11.1.1.13.2 (>75 %)  3.2.1 (>75 %)  3.2.1.113 (>75 %)  
GO : GO:0004022 (>50 %)  GO:0004022 (>75 %)  GO:0004553 (>75 %)  GO:0005509 (>75 %)  GO:0008270 (>50 %)  GO:0008270 (>75 %)  GO:0015923 (>75 %)  GO:0016614 (>50 %)  GO:0016614 (>75 %)  GO:0016616 (>50 %)  GO:0016616 (>75 %)  GO:0016798 (>75 %)  GO:0046914 (>50 %)  GO:0046914 (>75 %)  
SCOP : 48207 (>75 %)  48225 (>75 %)  48226 (>75 %)  50128 (>75 %)  50128 (>75 %)  50129 (>75 %)  50129 (>75 %)  50136 (>75 %)  50136 (>75 %)  51734 (>75 %)  51734 (>75 %)  51735 (>75 %)  51735 (>75 %)  51736 (>75 %)  51736 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 15.6 +/- 17.9
Average RMSD (Å) : 1.250 +/- 0.705

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXpppcXhXEXh
(φψ)-conformation: aapaalbppabb
Pattern: xxxxx[FLV][AGT][AFKL][EG]x[ASTV]x[GLT][CQ]xxx[DY][HKN]x[NST]x[DSTV][GK]x[AGL][NP][DE]x[FLVW]
Conservation:-0.071-0.465-0.066-1.225-0.1330.4180.168-1.1080.512-0.444-0.172-0.709-0.7042.289-0.465-0.933-0.3481.4321.003-1.0500.874-1.342-0.6400.512-0.079-0.5031.8192.477-0.874-0.172
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ayx_*_4241ayx   -429458VADNLVTFGDSFLQVILDHINDDGSLNEQLHHHHHHHHHHHHHHHHHHHS-TTS---SEEaaaaaaaaaaaaaaaaaaaxxaavxbxabb
1dl2_A_3721dl2   A372401KSDWDLAKGITDTCYQMYKQSSSGLAPEIVHHHHHHHHHHHHHHHHHHHTSTTS---SEEaaaaaaaaaaaaaaaaaaaaxaavbxxabb
1kre_A_3481kre   A348377QDFIDFGLELVDGCEATYNSTLTKIGPDSWHHHHHHHHHHHHHHHHHHHTSSSS---SEEaaaaaaaaaaaaaaaaaaaaxaavbxxabb
1nxc_A_4961nxc   A497526QHYLELGAEIARTCHESYNRTYVKLGPEAFHHHHHHHHHHHHHHHHHHHTSSSSS--SEEaaaaaaaaaaaaaaaaaaaabaavbxxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ayx_*_4241ayx   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL E - 456
1kre_A_3481kre   A     MANALPHA-D-MANNOSE Q - 348
1kre_A_3481kre   A     MANALPHA-D-MANNOSE I - 351
1kre_A_3481kre   A     MANALPHA-D-MANNOSE D - 352
1kre_A_3481kre   A     MANALPHA-D-MANNOSE L - 355
1kre_A_3481kre   A     NAGN-ACETYL-D-GLUCOSAMINE V - 358
1kre_A_3481kre   A     NAGN-ACETYL-D-GLUCOSAMINE D - 359
1kre_A_3481kre   A     MANALPHA-D-MANNOSE D - 359
1kre_A_3481kre   A     NAGN-ACETYL-D-GLUCOSAMINE G - 360
1kre_A_3481kre   A     NAGN-ACETYL-D-GLUCOSAMINE E - 362
1kre_A_3481kre   A     NAGN-ACETYL-D-GLUCOSAMINE A - 363
1kre_A_3481kre   A     NAGN-ACETYL-D-GLUCOSAMINE N - 366
1nxc_A_4961nxc   A     NAGN-ACETYL-D-GLUCOSAMINE H - 511
1nxc_A_4961nxc   A     NAGN-ACETYL-D-GLUCOSAMINE E - 512
1nxc_A_4961nxc   A     NAGN-ACETYL-D-GLUCOSAMINE N - 515
1nxc_A_4961nxc   A     NAGN-ACETYL-D-GLUCOSAMINE R - 516
1nxc_A_4961nxc   A     NAGN-ACETYL-D-GLUCOSAMINE K - 520
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ayx_*_4241ayx   * NULENZYME ACTIVE SITE AND TWO CATALYTIC CARBOXYLATES.E - 456

Clusters included in this Subclass
CLUSTER: HE.8.12